Towards large-scale sample annotation in gene expression repositories. - Erik Pitzer; Ronilda Lacson; Christian Hinske; Jihoon Kim 001; Pedro A. F. Galante; Lucila Ohno-Machado (BMC Bioinform., 2009)

DSGeo: Software tools for cross-platform analysis of gene expression data in GEO. - Ronilda Lacson; Erik Pitzer; Jihoon Kim 001; Pedro A. F. Galante; Christian Hinske; Lucila Ohno-Machado (J. Biomed. Informatics, 2010)

AnyExpress: Integrated toolkit for analysis of cross-platform gene expression data using a fast interval matching algorithm. - Jihoon Kim 001; Kiltesh Patel; Hyunchul Jung; Winston Patrick Kuo; Lucila Ohno-Machado (BMC Bioinform., 2011)

Using statistical and machine learning to help institutions detect suspicious access to electronic health records. - Aziz A. Boxwala; Jihoon Kim 001; Janice M. Grillo; Lucila Ohno-Machado (J. Am. Medical Informatics Assoc., 2011)

Trends in biomedical informatics: most cited topics from recent years. - Hyeoneui Kim; Xiaoqian Jiang; Jihoon Kim 001; Lucila Ohno-Machado (J. Am. Medical Informatics Assoc., 2011)

Selecting Cases for Whom Additional Tests Can Improve Prognostication. - Xiaoqian Jiang; Jihoon Kim 001; Yuan Wu 003; Lucila Ohno-Machado (AMIA, 2012)

A Robust Feature Selection Method for Novel Pre-microRNA Identification Using a Combination of Nucleotide-Structure Triplets. - Petra Stepanowsky; Jihoon Kim 001; Lucila Ohno-Machado (HISB, 2012)

A patient-driven adaptive prediction technique to improve personalized risk estimation for clinical decision support. - Xiaoqian Jiang; Aziz A. Boxwala; Robert E. El-Kareh; Jihoon Kim 001; Lucila Ohno-Machado (J. Am. Medical Informatics Assoc., 2012)

Calibrating predictive model estimates to support personalized medicine. - Xiaoqian Jiang; Melanie Osl; Jihoon Kim 001; Lucila Ohno-Machado (J. Am. Medical Informatics Assoc., 2012)

iDASH: integrating data for analysis, anonymization, and sharing. - Lucila Ohno-Machado; Vineet Bafna; Aziz A. Boxwala; Brian E. Chapman; Wendy Webber Chapman; Kamalika Chaudhuri; Michele E. Day; Claudiu Farcas; Nathaniel D. Heintzman; Xiaoqian Jiang; Hyeoneui Kim; Jihoon Kim 001; et al. (J. Am. Medical Informatics Assoc., 2012)

Grid Binary LOgistic REgression (GLORE): building shared models without sharing data. - Yuan Wu 003; Xiaoqian Jiang; Jihoon Kim 001; Lucila Ohno-Machado (J. Am. Medical Informatics Assoc., 2012)

MAGI: a Node.js web service for fast microRNA-Seq analysis in a GPU infrastructure. - Jihoon Kim 001; Eric Levy; Alex Ferbrache; Petra Stepanowsky; Claudiu Farcas; Shuang Wang 002; Stefan Brunner; Tyler Bath; Yuan Wu 003; Lucila Ohno-Machado (Bioinform., 2014)

HUGO: Hierarchical mUlti-reference Genome cOmpression for aligned reads. - Pinghao Li; Xiaoqian Jiang; Shuang Wang 002; Jihoon Kim 001; Hongkai Xiong; Lucila Ohno-Machado (J. Am. Medical Informatics Assoc., 2014)

Detecting inappropriate access to electronic health records using collaborative filtering. - Aditya Krishna Menon; Xiaoqian Jiang; Jihoon Kim 001; Jaideep Vaidya; Lucila Ohno-Machado (Mach. Learn., 2014)

Developing a predictive model for discharge delay in the Post-Anesthesia Care Unit. - Rodney A. Gabriel; Jihoon Kim 001; Lucila Ohno-Machado (AMIA, 2016)

Does Health Status Affect Patient Preferences for Sharing Clinical Data for Research? - Imho Jang; Diana Guijarro; Jimmy Quach; Jihoon Kim 001; Hyeon-Eui Kim; Elizabeth A. Bell; Robert E. El-Kareh; Lucila Ohno-Machado (AMIA, 2016)

Developing a Semantic Model to Describe Physical Activity Data. - Hyeon-Eui Kim; Jihoon Kim 001; Edna C. Shenvi; Jimmy Quach; Brian Sutjiadi; Alex Richardson; Ko-Wei Lin (Nursing Informatics, 2016)

Personas in online health communities. - Jina Huh; Bum Chul Kwon; Sung-Hee Kim; Sukwon Lee; Jaegul Choo; Jihoon Kim 001; Minje Choi; Ji Soo Yi (J. Biomed. Informatics, 2016)

Project A-G-T-C: Adding Genetic Test data in Clinical data warehouse. - Jonathan Wickes; Hyeoneui Kim; Hyun-Dae Kim; Jihoon Kim 001; Wenhong Zhu; Lucila Ohno-Machado; Olivier Harismendy (AMIA, 2017)

PRINCESS: Privacy-protecting Rare disease International Network Collaboration via Encryption through Software guard extensionS. - Feng Chen 016; Shuang Wang 002; Xiaoqian Jiang; Sijie Ding; Yao Lu 006; Jihoon Kim 001; Süleyman Cenk Sahinalp; Chisato Shimizu; Jane C. Burns; Victoria J. Wright; Eileen Png; Martin L. Hibberd; et al. (Bioinform., 2017)

Mechanisms to protect the privacy of families when using the transmission disequilibrium test in genome-wide association studies. - Meng Wang 007; Zhanglong Ji; Shuang Wang 002; Jihoon Kim 001; Hai Yang; Xiaoqian Jiang; Lucila Ohno-Machado (Bioinform., 2017)

iCONCUR: informed consent for clinical data and bio-sample use for research. - Hyeoneui Kim; Elizabeth A. Bell; Jihoon Kim 001; Amy M. Sitapati; Joe Ramsdell; Claudiu Farcas; Dexter Friedman; Stephanie Feudjio Feupe; Lucila Ohno-Machado (J. Am. Medical Informatics Assoc., 2017)

The Impact of Automatic Pre-annotation in Clinical Note Data Element Extraction - the CLEAN Tool. - Tsung-Ting Kuo; Jina Huh; Jihoon Kim 001; Robert E. El-Kareh; Siddharth Singh; Stephanie Feudjio Feupe; Vincent Kuri; Gordon Lin; Michele E. Day; Lucila Ohno-Machado; Chun-Nan Hsu (CoRR, 2018)

Evaluating and sharing global genetic ancestry in biomedical datasets. - Olivier Harismendy; Jihoon Kim 001; Xiaojun Xu; Lucila Ohno-Machado (J. Am. Medical Informatics Assoc., 2019)

Longitudinal Cohort Data Transformation Based on a Common Data Model and Metadata Standards: Examples from the Strong Heart Study. - Jihoon Kim 001; Paulina Paul; Pravina Kota; Yu R. Park; Julie A. Stoner; Wenyu Wang; Ying Zhang; Elisa Lee; Lucila Ohno-Machado (AMIA, 2020)

Privacy-preserving model learning on a blockchain network-of-networks. - Tsung-Ting Kuo; Jihoon Kim 001; Rodney A. Gabriel (J. Am. Medical Informatics Assoc., 2020)

Benchmarking blockchain-based gene-drug interaction data sharing methods: A case study from the iDASH 2019 secure genome analysis competition blockchain track. - Tsung-Ting Kuo; Tyler Bath; Shuaicheng Ma; Nicholas D. Pattengale; Meng Yang; Yang Cao 011; Corey M. Hudson; Jihoon Kim 001; Kai W. Post; Li Xiong 001; Lucila Ohno-Machado (Int. J. Medical Informatics, 2021)

Privacy-protecting, reliable response data discovery using COVID-19 patient observations. - Jihoon Kim 001; Larissa Neumann; Paulina Paul; Michele E. Day; Michael Aratow; Douglas S. Bell; Jason N. Doctor; Ludwig Christian G. Hinske; Xiaoqian Jiang; Katherine K. Kim; Michael E. Matheny; Daniella Meeker; et al. (J. Am. Medical Informatics Assoc., 2021)

The evolving privacy and security concerns for genomic data analysis and sharing as observed from the iDASH competition. - Tsung-Ting Kuo; Xiaoqian Jiang; Haixu Tang; XiaoFeng Wang 001; Arif Ozgun Harmanci; Miran Kim; Kai W. Post; Diyue Bu; Tyler Bath; Jihoon Kim 001; Weijie Liu 004; Hongbo Chen; et al. (J. Am. Medical Informatics Assoc., 2022)

Blockchain-enabled immutable, distributed, and highly available clinical research activity logging system for federated COVID-19 data analysis from multiple institutions. - Tsung-Ting Kuo; Anh Pham; Maxim E. Edelson; Jihoon Kim 001; Jason Chan; Yash Gupta; Lucila Ohno-Machado; David M. Anderson; Chandrasekar Balacha; Tyler Bath; Sally L. Baxter; Andrea Becker-Pennrich; et al. (J. Am. Medical Informatics Assoc., 2023)

WICOX: Weight-Based Integrated Cox Model for Time-to-Event Data in Distributed Databases Without Data-Sharing. - Ji A. Park; Tae H. Kim; Jihoon Kim 001; Yu Rang Park (IEEE J. Biomed. Health Informatics, 2023)