Mining frequent partial periodic patterns in spectrum usage data. - Pei Huang 001; Chin-Jung Liu 001; Li Xiao 001; Jin Chen 004 (IWQoS, 2012)

Wireless Spectrum Occupancy Prediction Based on Partial Periodic Pattern Mining. - Pei Huang 001; Chin-Jung Liu 001; Li Xiao 001; Jin Chen 004 (MASCOTS, 2012)

Optimal timepoint sampling in high-throughput gene expression experiments. - Bruce A. Rosa; Ji Zhang; Ian T. Major; Wensheng Qin; Jin Chen 004 (Bioinform., 2012)

Frequency-based time-series gene expression recomposition using PRIISM. - Bruce A. Rosa; Yuhua Jiao; Sookyung Oh; Beronda L. Montgomery; Wensheng Qin; Jin Chen 004 (BMC Syst. Biol., 2012)

Detection and Decomposition: Treatment-induced Cyclic gene Expression Disruption in High-Throughput Time-Series Datasets. - Yuhua Jiao; Bruce A. Rosa; Sookyung Oh; Beronda L. Montgomery; Wensheng Qin; Jin Chen 004 (J. Bioinform. Comput. Biol., 2012)

Identifying cross-category relations in gene ontology and constructing genome-specific term association networks. - Jiajie Peng; Jin Chen 004; Yadong Wang 001 (BMC Bioinform., 2013)

Functional approach to high-throughput plant growth analysis. - Oliver L. Tessmer; Yuhua Jiao; Jeffrey A. Cruz; David M. Kramer 001; Jin Chen 004 (BMC Syst. Biol., 2013)

Multi-leaf tracking from fluorescence plant videos. - Xi Yin 001; Xiaoming Liu 002; Jin Chen 004; David M. Kramer 001 (ICIP, 2014)

Multi-leaf alignment from fluorescence plant images. - Xi Yin 001; Xiaoming Liu 002; Jin Chen 004; David M. Kramer 001 (WACV, 2014)

Towards integrative gene functional similarity measurement. - Jiajie Peng; Yadong Wang 001; Jin Chen 004 (BMC Bioinform., 2014)

An integrative approach for measuring semantic similarities using gene ontology. - Jiajie Peng; Hongxiang Li; Qinghua Jiang; Yadong Wang 001; Jin Chen 004 (BMC Syst. Biol., 2014)

Wireless Spectrum Occupancy Prediction Based on Partial Periodic Pattern Mining. - Pei Huang 001; Chin-Jung Liu 001; Xi Yang 016; Li Xiao 001; Jin Chen 004 (IEEE Trans. Parallel Distributed Syst., 2014)

Improving biological significance of gene expression biclusters with key missing genes. - Shufan Ji; Xing Tian; Jin Chen 004 (BCB, 2015)

A web tool for measuring gene semantic similarities by combining gene ontology and gene co-function networks. - Jiajie Peng; Hongxiang Li; Yadong Wang 001; Jin Chen 004 (BCB, 2015)

Incremental Distributed Weighted Class Discriminant Analysis on Interval-Valued Emitter Parameters. - Xin Xu; Wei Wang 002; Jiaheng Lu; Jin Chen 004 (KSEM, 2015)

Plant photosynthesis phenomics data quality control. - Lei Xu; Jeffrey A. Cruz; Linda J. Savage; David M. Kramer 001; Jin Chen 004 (Bioinform., 2015)

Measuring semantic similarities by combining gene ontology annotations and gene co-function networks. - Jiajie Peng; Sahra Uygun; Taehyong Kim; Yadong Wang 001; Seung Y. Rhee; Jin Chen 004 (BMC Bioinform., 2015)

Joint Multi-Leaf Segmentation, Alignment and Tracking from Fluorescence Plant Videos. - Xi Yin 001; Xiaoming Liu 002; Jin Chen 004; David M. Kramer 001 (CoRR, 2015)

Measuring phenotype semantic similarity using Human Phenotype Ontology. - Jiajie Peng; Hansheng Xue; Yukai Shao; Xuequn Shang 001; Yadong Wang 001; Jin Chen 004 (BIBM, 2016)

Growing Depth Image Superpixels for Foliage Modeling. - Daniel D. Morris; Saif Muhammad Imran; Jin Chen 004; David M. Kramer 001 (CRV, 2016)

Inter-functional analysis of high-throughput phenotype data by non-parametric clustering and its application to photosynthesis. - Qiaozi Gao; Elisabeth Ostendorf; Jeffrey A. Cruz; Rong Jin; David M. Kramer 001; Jin Chen 004 (Bioinform., 2016)

Extending gene ontology with gene association networks. - Jiajie Peng; Tao Wang 082; Jixuan Wang; Yadong Wang 001; Jin Chen 004 (Bioinform., 2016)

Multi-modality imagery database for plant phenotyping. - Jeffrey A. Cruz; Xi Yin 001; Xiaoming Liu 002; Saif Muhammad Imran; Daniel D. Morris; David M. Kramer 001; Jin Chen 004 (Mach. Vis. Appl., 2016)

PhenoCurve: capturing dynamic phenotype-environment relationships using phenomics data. - Yifan Yang; Lei Xu; Zheyun Feng; Jeffrey A. Cruz; Linda J. Savage; David M. Kramer 001; Jin Chen 004 (Bioinform., 2017)

A novel method to measure the semantic similarity of HPO terms. - Jiajie Peng; Hansheng Xue; Yukai Shao; Xuequn Shang 001; Yadong Wang 001; Jin Chen 004 (Int. J. Data Min. Bioinform., 2017)

Enhancing Radiomic Features of CT Images using Generative Adversarial Network with Alternative Improvement. - Gongbo Liang; Jie Zhang 092; Michael A. Brooks; Jessica Howard; Jin Chen 004 (AMIA, 2018)

OLIVER: A Tool for Visual Data Analysis on Longitudinal Plant Phenomics Data. - Oliver L. Tessmer; David M. Kramer 001; Jin Chen 004 (BIBM, 2018)

Identifying Representative Network Motifs for Inferring Higher-order Structure of Biological Networks. - Tao Wang 082; Jiajie Peng; Yadong Wang 001; Jin Chen 004 (BIBM, 2018)

Chrysanthemum Abnormal Petal Type Classification using Random Forest and Over-sampling. - Peisen Yuan; Shougang Ren; Huanliang Xu; Jin Chen 004 (BIBM, 2018)

Predicting Substance Use Disorder in ADHD Patients using Long-Short Term Memory Model. - Sajjad Fouladvand; Emily R. Hankosky; Darren W. Henderson; Heather Bush; Jin Chen 004; Linda P. Dwoskin; Patricia R. Freeman; Kathleen Kantak; Jeffery C. Talbert; Shiqiang Tao; Guo-Qiang Zhang 001 (ICHI Workshops, 2018)

Joint Multi-Leaf Segmentation, Alignment, and Tracking for Fluorescence Plant Videos. - Xi Yin 001; Xiaoming Liu 002; Jin Chen 004; David M. Kramer 001 (IEEE Trans. Pattern Anal. Mach. Intell., 2018)

DoRC: Discovery of rare cells from ultra-large scRNA-seq data. - Xiang Chen; Fang-Xiang Wu; Jin Chen 004; Min Li 007 (BIBM, 2019)

A Knowledge Graph Enhanced Topic Modeling Approach for Herb Recommendation. - Xinyu Wang 017; Ying Zhang; Xiaoling Wang 004; Jin Chen 004 (DASFAA (1), 2019)

GANai: Standardizing CT Images using Generative Adversarial Network with Alternative Improvement. - Gongbo Liang; Sajjad Fouladvand; Jie Zhang 092; Michael A. Brooks; Nathan Jacobs; Jin Chen 004 (ICHI, 2019)

Identifying Acute Kidney Injury Trajectory Phenotypes Associated with Hospital Mortality. - Taylor D. Smith; Victor Ortiz-Soriano; Javier A. Neyra; Jin Chen 004 (ICHI, 2019)

Insomnia Prediction Using Temporal Feature of Spindles. - Hao Yu; Ying Zhang; Jin Chen 004; Shiqiang Tao; Taylor D. Smith; Guo-Qiang Zhang 001; Xiaojin Li; Xiaoqian Jiang; Xiaoling Wang 004; Xinyu Wang 017 (ICHI, 2019)

MC-eLDA: Towards Pathogenesis Analysis in Traditional Chinese Medicine by Multi-Content Embedding LDA. - Ying Zhang; Wendi Ji; Haofen Wang; Xiaoling Wang 004; Jin Chen 004 (PAKDD (1), 2019)

STAN-CT: Standardizing CT Image using Generative Adversarial Networks. - Md. Selim; Jie Zhang 092; Baowei Fei; Guo-Qiang Zhang 001; Jin Chen 004 (AMIA, 2020)

ELMV: an Ensemble-Learning Approach for Analyzing Electrical Health Records with Significant Missing Values. - Lucas Jing Liu; Hongwei Zhang; Jianzhong Di; Jin Chen 004 (BCB, 2020)

Identifying emerging phenomenon in long temporal phenotyping experiments. - Jiajie Peng; Junya Lu; Donghee Hoh; Ayesha S. Dina; Xuequn Shang 001; David M. Kramer 001; Jin Chen 004 (Bioinform., 2020)

STAN-CT: Standardizing CT Image using Generative Adversarial Network. - Md. Selim; Jie Zhang 092; Baowei Fei; Guo-Qiang Zhang 001; Jin Chen 004 (CoRR, 2020)

ELMV: a Ensemble-Learning Approach for Analyzing Electrical Health Records with Significant Missing Values. - Lucas Jing Liu; Hongwei Zhang; Jianzhong Di; Jin Chen 004 (CoRR, 2020)

Predicting substance use disorder using long-term attention deficit hyperactivity disorder medication records in Truven. - Sajjad Fouladvand; Emily R. Hankosky; Heather Bush; Jin Chen 004; Linda P. Dwoskin; Patricia R. Freeman; Darren W. Henderson; Kathleen Kantak; Jeffery C. Talbert; Shiqiang Tao; Guo-Qiang Zhang 001 (Health Informatics J., 2020)

Mining Relationships among Multiple Entities in Biological Networks. - Jiajie Peng; Linjiao Zhu; Yadong Wang 001; Jin Chen 004 (IEEE ACM Trans. Comput. Biol. Bioinform., 2020)

Identifying Opioid Use Disorder from Longitudinal Healthcare Data using a Multi-stream Transformer. - Sajjad Fouladvand; Jeffery C. Talbert; Linda P. Dwoskin; Heather M. Bush; Amy Lynn Meadows; Lars E. Peterson; Steve K. Roggenkamp; Ramakanth Kavuluru; Jin Chen 004 (AMIA, 2021)

Cross-Vendor CT Image Data Harmonization Using CVH-CT. - Md. Selim; Jie Zhang 092; Baowei Fei; Guo-Qiang Zhang 001; Gary Yeeming Ge; Jin Chen 004 (AMIA, 2021)

KGDAL: knowledge graph guided double attention LSTM for rolling mortality prediction for AKI-D patients. - Lucas Jing Liu; Victor Ortiz-Soriano; Javier A. Neyra; Jin Chen 004 (BCB, 2021)

Alzheimer's Disease Classification Using Genetic Data. - Subash Khanal; Jin Chen 004; Nathan Jacobs; Ai-Ling Lin (BIBM, 2021)

CT Image Harmonization for Enhancing Radiomics Studies. - Md. Selim; Jie Zhang 092; Baowei Fei; Guo-Qiang Zhang 001; Jin Chen 004 (BIBM, 2021)

Predicting Opioid Use Disorder from Longitudinal Healthcare Data using Multi-stream Transformer. - Sajjad Fouladvand; Jeffery C. Talbert; Linda P. Dwoskin; Heather Bush; Amy Lynn Meadows; Lars E. Peterson; Ramakanth Kavuluru; Jin Chen 004 (CoRR, 2021)

SSRE: Cell Type Detection Based on Sparse Subspace Representation and Similarity Enhancement. - Zhenlan Liang; Min Li 007; Ruiqing Zheng; Yu Tian; Xuhua Yan; Jin Chen 004; Fang-Xiang Wu; Jianxin Wang 001 (Genom. Proteom. Bioinform., 2021)

KIT-LSTM: Knowledge-guided Time-aware LSTM for Continuous Clinical Risk Prediction. - Lucas Jing Liu; Victor Ortiz-Soriano; Javier A. Neyra; Jin Chen 004 (BIBM, 2022)

UDA-CT: A General Framework for CT Image Standardization. - Md. Selim; Jie Zhang 092; Baowei Fei; Matthew A. Lewis; Guo-Qiang Zhang 001; Jin Chen 004 (BIBM, 2022)

Enhancing discoveries of molecular QTL studies with small sample size using summary statistic imputation. - Tao Wang 082; Yongzhuang Liu; Quanwei Yin; Jiaquan Geng; Jin Chen 004; Xipeng Yin; Yongtian Wang; Xuequn Shang 001; Chunwei Tian; Yadong Wang 001; Jiajie Peng (Briefings Bioinform., 2022)

Correction to: Enhancing discoveries of molecular QTL studies with small sample size using summary statistic imputation. - Tao Wang 082; Yongzhuang Liu; Quanwei Yin; Jiaquan Geng; Jin Chen 004; Xipeng Yin; Yongtian Wang; Xuequn Shang 001; Chunwei Tian; Yadong Wang 001; Jiajie Peng (Briefings Bioinform., 2022)

Assessing Fairness of AlphaFold2 Prediction of Protein 3D Structures. - Usman L. Abbas; Jin Chen 004; Qing Shao (BCB, 2023)

DiffusionCT: Latent Diffusion Model for CT Image Standardization. - Md. Selim; Jie Zhang 092; Michael A. Brooks; Ge Wang; Jin Chen 004 (CoRR, 2023)

A Comparative Effectiveness Study on Opioid Use Disorder Prediction Using Artificial Intelligence and Existing Risk Models. - Sajjad Fouladvand; Jeffery C. Talbert; Linda P. Dwoskin; Heather Bush; Amy Lynn Meadows; Lars E. Peterson; Yash R. Mishra; Steven K. Roggenkamp; Fei Wang; Ramakanth Kavuluru; Jin Chen 004 (IEEE J. Biomed. Health Informatics, 2023)

Accurately deciphering spatial domains for spatially resolved transcriptomics with stCluster. - Tao Wang 082; Han Shu; Jialu Hu; Yongtian Wang; Jin Chen 004; Jiajie Peng; Xuequn Shang 001 (Briefings Bioinform., 2024)

postGWAS: A web server for deciphering the causality post the genome-wide association studies. - Tao Wang 082; Zhihao Yan; Yiming Zhang; Zhuofei Lou; Xiaozhu Zheng; Duoduo Mai; Yongtian Wang; Xuequn Shang 001; Bing Xiao 001; Jiajie Peng; Jin Chen 004 (Comput. Biol. Medicine, 2024)

Text2MDT: Extracting Medical Decision Trees from Medical Texts. - Wei Zhu 016; Wenfeng Li; Xing Tian; Pengfei Wang; Xiaoling Wang 004; Jin Chen 004; Yuanbin Wu; Yuan Ni; Guotong Xie (CoRR, 2024)