Protein Threading by Linear Programming. - Jinbo Xu; Ming Li 001; Guo-Hui Lin; Dongsup Kim; Ying Xu 001 (Pacific Symposium on Biocomputing, 2003)

Speedup LP Approach to Protein Threading via Graph Reduction. - Jinbo Xu (WABI, 2003)

Raptor: Optimal Protein Threading by Linear Programming. - Jinbo Xu; Ming Li 001; Dongsup Kim; Ying Xu 001 (J. Bioinform. Comput. Biol., 2003)

Approximation algorithms for NMR spectral peak assignment. - Zhi-Zhong Chen; Tao Jiang 001; Guo-Hui Lin; Jianjun Wen; Dong Xu 002; Jinbo Xu; Ying Xu 001 (Theor. Comput. Sci., 2003)

Protein Threading by Linear Programming: Theoretical Analysis and Computational Results. - Jinbo Xu; Ming Li 001; Ying Xu 001 (J. Comb. Optim., 2004)

Consensus fold recognition by predicted model quality. - Jinbo Xu; Libo Yu; Ming Li 001 (APBC, 2005)

A Tree-Decomposition Approach to Protein Structure Prediction. - Jinbo Xu; Feng Jiao; Bonnie Berger (CSB, 2005)

Discovering Sequence-Structure Motifs from Protein Segments and Two Applications. - Thomas Tang; Jinbo Xu; Ming Li 001 (Pacific Symposium on Biocomputing, 2005)

Rapid Protein Side-Chain Packing via Tree Decomposition. - Jinbo Xu (RECOMB, 2005)

Fold Recognition by Predicted Alignment Accuracy. - Jinbo Xu (IEEE ACM Trans. Comput. Biol. Bioinform., 2005)

Robust and real-time automatic target recognition using partial hausdorff distance measure on reconfigurable hardware. - Jinbo Xu; Yong Dou (FPT, 2006)

Struct2Net: Integrating Structure into Protein-Protein Interaction Prediction. - Rohit Singh 001; Jinbo Xu; Bonnie Berger (Pacific Symposium on Biocomputing, 2006)

Fast and accurate algorithms for protein side-chain packing. - Jinbo Xu; Bonnie Berger (J. ACM, 2006)

Optimizing Multiple Spaced Seeds for Homology Search. - Jinbo Xu; Daniel G. Brown 001; Ming Li 001; Bin Ma 002 (J. Comput. Biol., 2006)

FPGA-Accelerated Active Shape Model for Real-Time People Tracking. - Yong Dou; Jinbo Xu (Asia-Pacific Computer Systems Architecture Conference, 2007)

Solving the contact map overlap problem via tree decomposition and a DEE-like pruning strategy. - Jinbo Xu (CDC, 2007)

FPGA Accelerating Algorithms of Active Shape Model in People Tracking Applications. - Jinbo Xu; Yong Dou; Junfeng Li; Xingming Zhou; Qiang Dou (DSD, 2007)

Pairwise Global Alignment of Protein Interaction Networks by Matching Neighborhood Topology. - Rohit Singh 001; Jinbo Xu; Bonnie Berger (RECOMB, 2007)

A Parameterized Algorithm for Protein Structure Alignment. - Jinbo Xu; Feng Jiao; Bonnie Berger (J. Comput. Biol., 2007)

Multi-access memory architecture for image applications with multiple interested regions. - Jinbo Xu; Yong Dou; Jie Zhou 007 (APCCAS, 2008)

Hardware BLAST Algorithms with Multi-seeds Detection and Parallel Extension. - Fei Xia 003; Yong Dou; Jinbo Xu (ARC, 2008)

Finding Largest Well-Predicted Subset of Protein Structure Models. - Shuai Cheng Li 001; Dongbo Bu; Jinbo Xu; Ming Li 001 (CPM, 2008)

Double Precision Hybrid-Mode Floating-Point FPGA CORDIC Co-processor. - Jie Zhou 007; Yong Dou; Yuanwu Lei; Jinbo Xu; Yazhuo Dong (HPCC, 2008)

Designing succinct structural alphabets. - Shuai Cheng Li 001; Dongbo Bu; Xin Gao 001; Jinbo Xu; Ming Li 001 (ISMB, 2008)

Rectangularly Multi-Module Memory System with Table-Based Dynamic Addressing Scheme. - Jinbo Xu; Yong Dou; Jie Zhou 007 (NAS, 2008)

Global Alignment of Multiple Protein Interaction Networks. - Rohit Singh 001; Jinbo Xu; Bonnie Berger (Pacific Symposium on Biocomputing, 2008)

Rapid and Accurate Protein Side Chain Prediction with Local Backbone Information. - Jing Zhang 012; Xin Gao 001; Jinbo Xu; Ming Li 001 (RECOMB, 2008)

Graph algorithms for biological systems analysis. - Bonnie Berger; Rohit Singh 001; Jinbo Xu (SODA, 2008)

Global alignment of multiple protein interaction networks with application to functional orthology detection. - Rohit Singh 001; Jinbo Xu; Bonnie Berger (Proc. Natl. Acad. Sci. USA, 2008)

Implementation of Rotation Invariant Multi-View Face Detection on FPGA. - Jinbo Xu; Yong Dou; Yuxing Tang; Xiaodong Wang 002 (APPT, 2009)

FPGA accelerating three QR decomposition algorithms in the unified pipelined framework. - Yong Dou; Jie Zhou 007; Xiaoyang Chen; Yuanwu Lei; Jinbo Xu (FPL, 2009)

Conditional Neural Fields. - Jian Peng 001; Liefeng Bo; Jinbo Xu (NIPS, 2009)

Boosting Protein Threading Accuracy. - Jian Peng 001; Jinbo Xu (RECOMB, 2009)

A Probabilistic Graphical Model for Ab Initio Folding. - Feng Zhao; Jian Peng 001; Joe DeBartolo; Karl F. Freed; Tobin R. Sosnick; Jinbo Xu (RECOMB, 2009)

A Reconfigurable Architecture for Rotation Invariant Multi-View Face Detection Based on a Novel Two-Stage Boosting Method. - Jinbo Xu; Yong Dou; Zhengbin Pang (EURASIP J. Adv. Signal Process., 2009)

Predicting Local Quality of a Sequence-Structure Alignment. - Xin Gao 001; Jinbo Xu; Shuai Cheng Li 001; Ming Li 001 (J. Bioinform. Comput. Biol., 2009)

Finding compact structural motifs. - Dongbo Bu; Ming Li 001; Shuai Cheng Li 001; Jianbo Qian; Jinbo Xu (Theor. Comput. Sci., 2009)

Protein 8-class secondary structure prediction using Conditional Neural Fields. - Zhiyong Wang 005; Feng Zhao; Jian Peng 001; Jinbo Xu (BIBM, 2010)

Low-homology protein threading. - Jian Peng 001; Jinbo Xu (Bioinform., 2010)

Fragment-free approach to protein folding using conditional neural fields. - Feng Zhao; Jian Peng 001; Jinbo Xu (Bioinform., 2010)

A Probabilistic and Continuous Model of Protein Conformational Space for Template-Free Modeling. - Feng Zhao; Jian Peng 001; Joe DeBartolo; Karl F. Freed; Tobin R. Sosnick; Jinbo Xu (J. Comput. Biol., 2010)

Struct2Net: a web service to predict protein-protein interactions using a structure-based approach. - Rohit Singh 001; Daniel Park; Jinbo Xu; Raghavendra Hosur; Bonnie Berger (Nucleic Acids Res., 2010)

A Parallel Processing Scheme for Large-Size Sliding-Window Applications. - Weixia Xu; Jinbo Xu; Zhengbin Pang (HPCC, 2011)

Alignment of distantly related protein structures: algorithm, bound and implications to homology modeling. - Sheng Wang 001; Jian Peng 001; Jinbo Xu (Bioinform., 2011)

A conditional random fields method for RNA sequence-structure relationship modeling and conformation sampling. - Zhiyong Wang 005; Jinbo Xu (Bioinform., 2011)

Finding Nearly Optimal GDT Scores. - Shuai Cheng Li 001; Dongbo Bu; Jinbo Xu; Ming Li 001 (J. Comput. Biol., 2011)

A conditional neural fields model for protein threading. - Jianzhu Ma; Jian Peng 001; Sheng Wang 001; Jinbo Xu (Bioinform., 2012)

A Two-Graph Guided Multi-task Lasso Approach for eQTL Mapping. - Xiaohui Chen; Xinghua Shi; Xing Xu; Zhiyong Wang 005; Ryan Mills; Charles Lee; Jinbo Xu (AISTATS, 2012)

Approximate Inference by Intersecting Semidefinite Bound and Local Polytope. - Jian Peng 001; Tamir Hazan; Nathan Srebro; Jinbo Xu (AISTATS, 2012)

Estimating the Partition Function of Graphical Models Using Langevin Importance Sampling. - Jianzhu Ma; Jian Peng 001; Sheng Wang 001; Jinbo Xu (AISTATS, 2013)

Direction-Optimizing Breadth-First Search on CPU-GPU Heterogeneous Platforms. - Dan Zou; Yong Dou; Qiang Wang 006; Jinbo Xu; Baofeng Li (HPCC/EUC, 2013)

An Effective Framework of Program Optimization for High Performance Computing. - Pingjing Lu; Bao Li 002; Zhengbin Pang; Ying Zhang 032; Shaogang Wang; Jinbo Xu; Yan Liu (NCCET, 2013)

Achieving Predictable Performance in SMT Processors by Instruction Fetch Policy. - Caixia Sun; Yongwen Wang; Jinbo Xu (NCCET, 2013)

Protein threading using context-specific alignment potential. - Jianzhu Ma; Sheng Wang 001; Feng Zhao; Jinbo Xu (Bioinform., 2013)

Predicting protein contact map using evolutionary and physical constraints by integer programming. - Zhiyong Wang 005; Jinbo Xu (Bioinform., 2013)

Protein contact prediction by joint evolutionary coupling analysis across multiple families. - Jianzhu Ma; Sheng Wang 001; Jinbo Xu (CoRR, 2013)

Predicting protein contact map using evolutionary and physical constraints by integer programming (extended version). - Zhiyong Wang 005; Jinbo Xu (CoRR, 2013)

From WiFi to WiMAX: Efficient GPU-based Parameterized Transceiver across Different OFDM Protocols. - Rongchun Li; Yong Dou; Jie Zhou 007; Baofeng Li; Jinbo Xu (KSII Trans. Internet Inf. Syst., 2013)

VLIW coprocessor for IEEE-754 quadruple-precision elementary functions. - Yuanwu Lei; Yong Dou; Lei Guo 029; Jinbo Xu; Jie Zhou 007; Yazhuo Dong; Hongjian Li (ACM Trans. Archit. Code Optim., 2013)

Adaptive Variable Clustering in Gaussian Graphical Models. - Siqi Sun; Yuancheng Zhu; Jinbo Xu (AISTATS, 2014)

CNVnet: combining sparse learning and biological networks to capture joint effect of copy number variants. - Zhiyong Wang 005; Jinbo Xu; Xinghua Shi (BCB, 2014)

Low-latency last-level cache structure based on grouped cores in Chip Multi-Processor. - Jinbo Xu; Weixia Xu; Kefei Wang; Zhengbin Pang (IPCCC, 2014)

HubAlign: an accurate and efficient method for global alignment of protein-protein interaction networks. - Somaye Hashemifar; Jinbo Xu (Bioinform., 2014)

Finding Alternative Expression Quantitative Trait Loci by Exploring Sparse Model Space. - Zhiyong Wang 005; Jinbo Xu; Xinghua Shi (J. Comput. Biol., 2014)

Lynx: a database and knowledge extraction engine for integrative medicine. - Dinanath Sulakhe; Sandhya Balasubramanian; Bingqing Xie; Bo Feng; Andrew Taylor; Sheng Wang 001; Eduardo Berrocal; Utpal J. Dave; Jinbo Xu; Daniela Börnigen; T. Conrad Gilliam; Natalia Maltsev (Nucleic Acids Res., 2014)

MRFalign: Protein Homology Detection through Alignment of Markov Random Fields. - Jianzhu Ma; Sheng Wang 001; Zhiyong Wang 005; Jinbo Xu (PLoS Comput. Biol., 2014)

FPGA Implementation of a Special-Purpose VLIW Structure for Double-Precision Elementary Function. - Yuanwu Lei; Lei Guo 029; Yong Dou; Sheng Ma; Jinbo Xu (ACM Trans. Reconfigurable Technol. Syst., 2014)

Inferring Block Structure of Graphical Models in Exponential Families. - Siqi Sun; Hai Wang; Jinbo Xu (AISTATS, 2015)

Bermuda: de novo assembly of transcripts with new insights for handling uneven coverage. - Qingming Tang; Sheng Wang 001; Jian Peng 001; Jianzhu Ma; Jinbo Xu (BCB, 2015)

Joint inference of tissue-specific networks with a scale free topology. - Somaye Hashemifar; Behnam Neyshabur; Jinbo Xu (BIBM, 2015)

Predicting diverse M-best protein contact maps. - Siqi Sun; Jianzhu Ma; Sheng Wang 001; Jinbo Xu (BIBM, 2015)

Learning Scale-Free Networks by Dynamic Node Specific Degree Prior. - Qingming Tang; Siqi Sun; Jinbo Xu (ICML, 2015)

Classification of Tiangong-1 hyperspectral remote sensing image via contextual sparse coding. - Qi Lv; Yong Dou; Xin Niu 002; Jiaqing Xu; Jinbo Xu (ICMLC, 2015)

A low-latency fine-grained dynamic shared cache management scheme for chip multi-processor. - Jinbo Xu; Weixia Xu; Zhengbin Pang (IPCCC, 2015)

Learning structured densities via infinite dimensional exponential families. - Siqi Sun; Mladen Kolar; Jinbo Xu (NIPS, 2015)

Exact Hybrid Covariance Thresholding for Joint Graphical Lasso. - Qingming Tang; Chao Yang; Jian Peng 001; Jinbo Xu (ECML/PKDD (2), 2015)

Structure Learning Constrained by Node-Specific Degree Distribution. - Jianzhu Ma; Feng Zhao; Jinbo Xu (UAI, 2015)

Protein contact prediction by integrating joint evolutionary coupling analysis and supervised learning. - Jianzhu Ma; Sheng Wang 001; Zhiyong Wang 005; Jinbo Xu (Bioinform., 2015)

Learning Scale Free Network by Node Specific Degree Prior. - Qingming Tang; Siqi Sun; Chao Yang; Jinbo Xu (CoRR, 2015)

Protein secondary structure prediction using deep convolutional neural fields. - Sheng Wang 001; Jian Peng 001; Jianzhu Ma; Jinbo Xu (CoRR, 2015)

AUC-maximized Deep Convolutional Neural Fields for Sequence Labeling. - Sheng Wang 001; Siqi Sun; Jinbo Xu (CoRR, 2015)

Disease Gene Prioritization Using Network and Feature. - Bingqing Xie; Gady Agam; Sandhya Balasubramanian; Jinbo Xu; T. Conrad Gilliam; Natalia Maltsev; Daniela Börnigen (J. Comput. Biol., 2015)

Urban Land Use and Land Cover Classification Using Remotely Sensed SAR Data through Deep Belief Networks. - Qi Lv; Yong Dou; Xin Niu 002; Jiaqing Xu; Jinbo Xu; Fei Xia 003 (J. Sensors, 2015)

Protein Homology Detection Through Alignment of Markov Random Fields - Using MRFalign - Jinbo Xu; Sheng Wang 001; Jianzhu Ma (Springer, 2015)

AUC-Maximized Deep Convolutional Neural Fields for Protein Sequence Labeling. - Sheng Wang 001; Siqi Sun; Jinbo Xu (ECML/PKDD (2), 2016)

ModuleAlign: module-based global alignment of protein-protein interaction networks. - Somaye Hashemifar; Jianzhu Ma; Hammad Naveed; Stefan Canzar; Jinbo Xu (Bioinform., 2016)

AUCpreD: proteome-level protein disorder prediction by AUC-maximized deep convolutional neural fields. - Sheng Wang 001; Jianzhu Ma; Jinbo Xu (Bioinform., 2016)

Network Inference by Learned Node-Specific Degree Prior. - Qingming Tang; Lifu Tu; Weiran Wang; Jinbo Xu (CoRR, 2016)

Joint Alignment of Multiple Protein-Protein Interaction Networks via Convex Optimization. - Somaye Hashemifar; Qixing Huang; Jinbo Xu (J. Comput. Biol., 2016)

Lynx: a knowledge base and an analytical workbench for integrative medicine. - Dinanath Sulakhe; Bingqing Xie; Andrew Taylor; Mark D'Souza; Sandhya Balasubramanian; Somaye Hashemifar; Steven White; Utpal J. Dave; Gady Agam; Jinbo Xu; Sheng Wang 001; T. Conrad Gilliam; et al. (Nucleic Acids Res., 2016)

RaptorX-Property: a web server for protein structure property prediction. - Sheng Wang 001; Wei Li; Shiwang Liu; Jinbo Xu (Nucleic Acids Res., 2016)

CoinFold: a web server for protein contact prediction and contact-assisted protein folding. - Sheng Wang 001; Wei Li; Renyu Zhang; Shiwang Liu; Jinbo Xu (Nucleic Acids Res., 2016)

Folding Large Proteins by Ultra-Deep Learning. - Jinbo Xu (BCB, 2017)

Folding Membrane Proteins by Deep Transfer Learning. - Zhen Li 026; Sheng Wang 001; Yizhou Yu; Jinbo Xu (RECOMB, 2017)

Predicting membrane protein contacts from non-membrane proteins by deep transfer learning. - Zhen Li 026; Sheng Wang 001; Yizhou Yu; Jinbo Xu (CoRR, 2017)

Accurate De Novo Prediction of Protein Contact Map by Ultra-Deep Learning Model. - Sheng Wang 001; Siqi Sun; Zhen Li 026; Renyu Zhang; Jinbo Xu (PLoS Comput. Biol., 2017)

A Sparse Learning Framework for Joint Effect Analysis of Copy Number Variants. - Zhiyong Wang 005; Benika Hall; Jinbo Xu; Xinghua Shi (IEEE ACM Trans. Comput. Biol. Bioinform., 2017)

Deep Learning Reveals Many More Inter-protein Residue-Residue Contacts than Direct Coupling Analysis. - Tianming Zhou; Sheng Wang 001; Jinbo Xu (RECOMB, 2018)

Predicting protein-protein interactions through sequence-based deep learning. - Somaye Hashemifar; Behnam Neyshabur; Aly A. Khan; Jinbo Xu (Bioinform., 2018)

Protein threading using residue co-variation and deep learning. - Jianwei Zhu; Sheng Wang 001; Dongbo Bu; Jinbo Xu (Bioinform., 2018)

RaptorX-Angle: real-value prediction of protein backbone dihedral angles through a hybrid method of clustering and deep learning. - Yujuan Gao; Sheng Wang 001; Minghua Deng; Jinbo Xu (BMC Bioinform., 2018)

ComplexContact: a web server for inter-protein contact prediction using deep learning. - Hong Zeng; Sheng Wang 001; Tianming Zhou; Feifeng Zhao; Xiufeng Li; Qing Wu; Jinbo Xu (Nucleic Acids Res., 2018)

Transmembrane Topology Identification by Fusing Evolutionary and Co-evolutionary Information with Cascaded Bidirectional Transformers. - Zhen Li 026; Chongming Ni; Jinbo Xu; Xin Gao 001; Shuguang Cui; Sheng Wang 001 (BCB, 2019)

stance-Based Protein Folding Powered by Deep Learning. - Jinbo Xu (RECOMB, 2019)

PredMP: a web server for de novo prediction and visualization of membrane proteins. - Sheng Wang 001; Shiyang Fei; Zongan Wang; Yu Li 006; Jinbo Xu; Feng Zhao; Xin Gao 001 (Bioinform., 2019)

Automated inference of Boolean models from molecular interaction maps using CaSQ. - Sara Sadat Aghamiri; Vidisha Singh; Aurélien Naldi; Tomás Helikar; Sylvain Soliman; Anna Niarakis; Jinbo Xu (Bioinform., 2020)

A Web-Based Protocol for Interprotein Contact Prediction by Deep Learning. - Xiaoyang Jing; Hong Zeng; Sheng Wang 001; Jinbo Xu (Protein-Protein Interaction Networks, 2020)

XOR-CD: Linearly Convergent Constrained Structure Generation. - Fan Ding; Jianzhu Ma; Jinbo Xu; Yexiang Xue (ICML, 2021)

PALM: Probabilistic area loss Minimization for Protein Sequence Alignment. - Fan Ding; Nan Jiang 012; Jianzhu Ma; Jian Peng 001; Jinbo Xu; Yexiang Xue (UAI, 2021)

ORFLine: a bioinformatic pipeline to prioritize small open reading frames identifies candidate secreted small proteins from lymphocytes. - Fengyuan Hu; Jia Lu; Louise S. Matheson; Manuel D. Díaz-Muñoz; Alexander Saveliev; Jinbo Xu; Martin Turner (Bioinform., 2021)

Improved protein model quality assessment by integrating sequential and pairwise features using deep learning. - Xiaoyang Jing; Jinbo Xu (Bioinform., 2021)

Study of real-valued distance prediction for protein structure prediction with deep learning. - Jin Li; Jinbo Xu (Bioinform., 2021)

Improved protein structure prediction by deep learning irrespective of co-evolution information. - Jinbo Xu; Matthew McPartlon; Jin Li (Nat. Mach. Intell., 2021)

Fast and effective protein model refinement using deep graph neural networks. - Xiaoyang Jing; Jinbo Xu (Nat. Comput. Sci., 2021)

Deep template-based protein structure prediction. - Fandi Wu; Jinbo Xu (PLoS Comput. Biol., 2021)

Analysis of the Attainable Design Paths of Non-heritage Cultural Tourism Immersion Experience - An Example of the Tujia City Living Room Project in Enshi Prefecture. - Jinbo Xu; Yueqing Wei (HCI (48), 2022)

Accurate protein function prediction via graph attention networks with predicted structure information. - Boqiao Lai; Jinbo Xu (Briefings Bioinform., 2022)

A tale of solving two computational challenges in protein science: neoantigen prediction and protein structure prediction. - Ngoc Hieu Tran; Jinbo Xu; Ming Li 001 (Briefings Bioinform., 2022)

Deep graph learning of inter-protein contacts. - Ziwei Xie; Jinbo Xu (Bioinform., 2022)

When Geometric Deep Learning Meets Pretrained Protein Language Models. - Fang Wu 002; Tao Yu 009; Dragomir Radev; Jinbo Xu (CoRR, 2022)

ProALIGN: Directly Learning Alignments for Protein Structure Prediction via Exploiting Context-Specific Alignment Motifs. - Lupeng Kong; Fusong Ju; Wei-Mou Zheng; Jianwei Zhu; Shiwei Sun; Jinbo Xu; Dongbo Bu (J. Comput. Biol., 2022)

Annotating functional effects of non-coding variants in neuropsychiatric cell types by deep transfer learning. - Boqiao Lai; Sheng Qian; Hanwei Zhang 004; Siwei Zhang; Anna A. Kozlova; Jubao Duan; Jinbo Xu; Xin He (PLoS Comput. Biol., 2022)

Research on the Aesthetic Connotation of New Media Ink Painting Art Based on Grounded Theory. - Wenyi Xu; Jinbo Xu; Zhipeng Zhang (HCI (24), 2023)

InstructBio: A Large-scale Semi-supervised Learning Paradigm for Biochemical Problems. - Fang Wu 002; Huiling Qin; Siyuan Li 002; Stan Z. Li; Xianyuan Zhan; Jinbo Xu (CoRR, 2023)

Improving protein structure prediction using templates and sequence embedding. - Fandi Wu; Xiaoyang Jing; Xiao Luo; Jinbo Xu (Bioinform., 2023)

Improved the heterodimer protein complex prediction with protein language models. - Bo Chen 026; Ziwei Xie; Jiezhong Qiu; Zhaofeng Ye; Jinbo Xu; Jie Tang 001 (Briefings Bioinform., 2023)

CAID prediction portal: a comprehensive service for predicting intrinsic disorder and binding regions in proteins. - Alessio Del Conte; Adel Bouhraoua; Mahta Mehdiabadi; Damiano Clementel; Alexander Miguel Monzon; Alex S. Holehouse; Daniel A. Griffith; Ryan J. Emenecker; Ashwini Patil; Ronesh Sharma; Tatsuhiko Tsunoda; Alok Sharma; et al. (Nucleic Acids Res., 2023)

Prediction of single-stranded DNA binding proteins with protein language model. - Siwen Wu; Jinbo Xu; Jun-tao Guo (BIBM, 2024)

A Robust and Efficient Risk Assessment Framework for Multi-Step Attacks. - Huimei Liao; Siyuan Leng; Junhai Yang; Jinbo Xu; Junhao Zhang; Jinling Tang (ICICT, 2024)

The Self-adaptive and Topology-aware MPI_Bcast leveraging Collective offload on Tianhe Express Interconnect. - Chongshan Liang; Yi Dai; Jun Xia; Jinbo Xu; Jintao Peng; Weixia Xu; Ming Xie; Jie Liu; Zhiquan Lai; Sheng Ma; Qi Zhu (IPDPS, 2024)

Collective Communication Acceleration Architecture for Reduce Operation with Long Operands Based on Efficient Data Access and Reconfigurable On-Chip Buffer. - Jinbo Xu; Zhengbin Pang; Yi Dai (ISPA, 2024)

ABAG-docking benchmark: a non-redundant structure benchmark dataset for antibody-antigen computational docking. - Nan Zhao; Bingqing Han; Cuicui Zhao; Jinbo Xu; Xinqi Gong (Briefings Bioinform., 2024)

Leveraging Multimodal Protein Representations to Predict Protein Melting Temperatures. - Daiheng Zhang; Yan Zeng; Xinyu Hong; Jinbo Xu (CoRR, 2024)

Support-Query Mutual Promotion and Classification Correction Network for Few-Shot Object Detection. - Jinbo Xu; Yong Wang 002; Xiaoyu He; Yiqun Zou (IEEE Signal Process. Lett., 2024)

Puppet Dynasty Recognition System Based on MobileNetV2. - Xiaona Xie; Zeqian Liu; Yuanshuai Wang; Haoyue Fu; Mengqi Liu; Yingqin Zhang; Jinbo Xu (Entropy, 2024)

Bidirectional Hierarchical Protein Multi-Modal Representation Learning. - Xuefeng Liu; Songhao Jiang; Chih-chan Tien; Jinbo Xu; Rick Stevens (CoRR, 2025)