Fully Automatic Synaptic Cleft Detection and Segmentation from EM Images Based on Deep Learning. - Bei Hong; Jing Liu 054; Weifu Li; Chi Xiao; Qiwei Xie; Hua Han 001 (BICS, 2018)

A Novel 3D Connection Algorithm of Mitochondria From ATUM-SEM Stacks Based on Segmentation Information in Context. - Weifu Li; Jing Liu 054; Chi Xiao; Hao Deng 006; Qiwei Xie; Hua Han 001 (EMBC, 2018)

Automatic Detection and Segmentation of Mitochondria from SEM Images using Deep Neural Network. - Jing Liu 054; Weifu Li; Chi Xiao; Bei Hong; Qiwei Xie; Hua Han 001 (EMBC, 2018)

Deep contextual residual network for electron microscopy image segmentation in connectomics. - Chi Xiao; Jing Liu 054; Xi Chen 031; Hua Han 001; Chang Shu 007; Qiwei Xie (ISBI, 2018)

A fast forward 3D connection algorithm for mitochondria and synapse segmentations from serial EM images. - Weifu Li; Jing Liu 054; Chi Xiao; Hao Deng 006; Qiwei Xie; Hua Han 001 (BioData Min., 2018)

Sparse self-attention aggregation networks for neural sequence slice interpolation. - Zejin Wang; Jing Liu 054; Xi Chen 031; Guoqing Li; Hua Han 001 (BioData Min., 2021)

An effective AI integrated system for neuron tracing on anisotropic electron microscopy volume. - Jing Liu 054; Bei Hong; Xi Chen 031; Qiwei Xie; Yuanyan Tang; Hua Han 001 (Biomed. Signal Process. Control., 2021)

Joint reconstruction of neuron and ultrastructure via connectivity consensus in electron microscope volumes. - Bei Hong; Jing Liu 054; Hao Zhai; Jiazheng Liu; Lijun Shen; Xi Chen 031; Qiwei Xie; Hua Han 001 (BMC Bioinform., 2022)

Deep residual contextual and subpixel convolution network for automated neuronal structure segmentation in micro-connectomics. - Chi Xiao; Bei Hong; Jing Liu 054; Yuanyan Tang; Qiwei Xie; Hua Han 001 (Comput. Methods Programs Biomed., 2022)

Planar to Spatial: a Synapse Reconstruction Method to Rebuild Voxel Connections for Anisotropic Serial EM Images. - Jinyue Guo; Jing Liu 054; Bei Hong; Yanchao Zhang; Yuxuan Xu; Hua Han 001 (ISBI, 2023)

Intra- and Inter-Cellular Awareness for 3D Neuron Tracking and Segmentation in Large-Scale Connectomics. - Hao Zhai; Jing Liu 054; Bei Hong; Jiazheng Liu; Qiwei Xie; Hua Han 001 (MIDL, 2023)

Graph partitioning algorithms with biological connectivity decisions for neuron reconstruction in electron microscope volumes. - Bei Hong; Jing Liu 054; Lijun Shen; Qiwei Xie; Jingbin Yuan; Ali Emrouznejad; Hua Han 001 (Expert Syst. Appl., 2023)

SAvEM3: Pretrained and Distilled Models for General-purpose 3D Neuron Reconstruction. - Hao Zhai; Jinyue Guo; Yanchao Zhang; Jing Liu 054; Hua Han 001 (BIBM, 2024)

SegNeuron: 3D Neuron Instance Segmentation in Any EM Volume with a Generalist Model. - Yanchao Zhang; Jinyue Guo; Hao Zhai; Jing Liu 054; Hua Han 001 (MICCAI (8), 2024)

A novel 3D instance segmentation network for synapse reconstruction from serial electron microscopy images. - Jing Liu 054; Bei Hong; Chi Xiao; Hao Zhai; Lijun Shen; Qiwei Xie; Hua Han 001 (Expert Syst. Appl., 2024)

Re-Isotropic Segmentation for Subcellular Ultrastructure in Anisotropic EM Images. - Jinyue Guo; Zejin Wang; Hao Zhai; Yanchao Zhang; Jing Liu 054; Hua Han 001 (IEEE Trans. Medical Imaging, 2025)