RNA-binding protein recognition based on multi-view deep feature and multi-label learning. - Haitao Yang; Zhaohong Deng; Xiaoyong Pan; Hong-Bin Shen; Kup-Sze Choi; Lei Wang; Shitong Wang 001; Jing Wu 030 (Briefings Bioinform., 2021)

circRNA-binding protein site prediction based on multi-view deep learning, subspace learning and multi-view classifier. - Hui Li; Zhaohong Deng; Haitao Yang; Xiaoyong Pan; Zhisheng Wei; Hong-Bin Shen; Kup-Sze Choi; Lei Wang; Shitong Wang 001; Jing Wu 030 (Briefings Bioinform., 2022)

MDGF-MCEC: a multi-view dual attention embedding model with cooperative ensemble learning for CircRNA-disease association prediction. - Qunzhuo Wu; Zhaohong Deng; Xiaoyong Pan; Hong-Bin Shen; Kup-Sze Choi; Shitong Wang 001; Jing Wu 030; Dong-Jun Yu (Briefings Bioinform., 2022)

MMSMAPlus: a multi-view multi-scale multi-attention embedding model for protein function prediction. - Zhongyu Wang; Zhaohong Deng; Wei Zhang 221; Qiongdan Lou; Kup-Sze Choi; Zhisheng Wei; Lei Wang; Jing Wu 030 (Briefings Bioinform., 2023)

Conformational Switch of the 250s Loop Enables the Efficient Transglycosylation in GH Family 77. - Zhiyong Guo; Lei Wang; Deming Rao; Weiqiong Liu; Miaomiao Xue; Qisheng Fu; Mengwei Lu; Lingqia Su; Sheng Chen; Binju Wang; Jing Wu 030 (J. Chem. Inf. Model., 2023)

EMOCPD: Efficient Attention-Based Models for Computational Protein Design Using Amino Acid Microenvironment. - Xiaoqi Ling; Cheng Cai; Demin Kong; Zhisheng Wei; Jing Wu 030; Lei Wang; Zhaohong Deng (J. Chem. Inf. Model., 2025)

Advancing Enzyme Optimal pH Prediction via Retrieved Embedding Data Augmentation. - Ziqi Zhang; Zhisheng Wei; Zhengqiang Qin; Lei Wang; Jinsong Gong; Jinsong Shi; Jing Wu 030; Zhaohong Deng (J. Chem. Inf. Model., 2025)

Modeling enzyme temperature stability from sequence segment perspective. - Ziqi Zhang; Shiheng Chen; Runze Yang; Zhisheng Wei; Wei Zhang 221; Lei Wang; Zhanzhi Liu; Fengshan Zhang; Jing Wu 030; Xiaoyong Pan; Hongbin Shen; Longbing Cao; et al. (CoRR, 2025)