Refined phylogenetic profiles method for predicting protein-protein interactions. - Jingchun Sun; Jinlin Xu; Zhen Liu; Qi Liu 024; Aimin Zhao; Tieliu Shi; Yi-Xue Li (Bioinform., 2005)

InPrePPI: an integrated evaluation method based on genomic context for predicting protein-protein interactions in prokaryotic genomes. - Jingchun Sun; Yan Sun; Guohui Ding 001; Qi Liu 024; Chuan Wang; Youyu He; Tieliu Shi; Yixue Li; Zhongming Zhao (BMC Bioinform., 2007)

Schizophrenia Genes: Characteristics of Function and Protein Interaction Networks. - Jingchun Sun; Leng Han; Zhongming Zhao (BMEI (1), 2008)

Pathway and Network Analysis of Schizophrenia Candidate Genes under Meta-Analysis Linkage Peaks. - Peilin Jia; Jingchun Sun; Leng Han; Zhongming Zhao (IJCBS, 2009)

Global Network Features of Cancer Genes in the Human Interactome. - Jingchun Sun; Peilin Jia; Zhongming Zhao (IJCBS, 2009)

A multi-dimensional evidence-based candidate gene prioritization approach for complex diseases-schizophrenia as a case. - Jingchun Sun; Peilin Jia; Ayman H. Fanous; Bradley Todd Webb; Edwin J. C. G. van den Oord; Xiangning Chen; József Bukszár; Kenneth S. Kendler; Zhongming Zhao (Bioinform., 2009)

Gene- and evidence-based candidate gene selection for schizophrenia and gene feature analysis. - Jingchun Sun; Leng Han; Zhongming Zhao (Artif. Intell. Medicine, 2010)

A Novel microRNA and transcription factor mediated regulatory network in schizophrenia. - An-Yuan Guo; Jingchun Sun; Peilin Jia; Zhongming Zhao (BMC Syst. Biol., 2010)

The simulated system dynamics analysis of the natural gas supply and demand. - Jingchun Sun; Ding Lv; Fan Wu (Kybernetes, 2010)

Development and implementation of a novel computational tool for an efficient construction of drug-target interactome. - Jingchun Sun; Paul Hart; Zhongming Zhao (BIBM Workshops, 2011)

Do cancer proteins really interact strongly in the human protein-protein interaction network? - Junfeng Xia; Jingchun Sun; Peilin Jia; Zhongming Zhao (Comput. Biol. Chem., 2011)

Gene regulation in glioblastoma: a combinatorial analysis of microRNAs and transcription factors. - Xue Gong; Jingchun Sun; Zhongming Zhao (Int. J. Comput. Biol. Drug Des., 2011)

A network and functional investigation of illicit drugs and their targets. - Ravi V. Atreya; Jingchun Sun; Zhongming Zhao (BIBM Workshops, 2012)

Comprehensive analyses of tumor suppressor genes in protein-protein interaction networks: A topological perspective. - Min Zhao 006; Jingchun Sun; Zhongming Zhao (GENSiPS, 2012)

DTome: a web-based tool for drug-target interactome construction. - Jingchun Sun; Yonghui Wu; Hua Xu 001; Zhongming Zhao (BMC Bioinform., 2012)

Large-scale prediction of adverse drug reactions using chemical, biological, and phenotypic properties of drugs. - Mei Liu; Yonghui Wu; Yukun Chen 001; Jingchun Sun; Zhongming Zhao; Xue-wen Chen 001; Michael E. Matheny; Hua Xu 001 (J. Am. Medical Informatics Assoc., 2012)

Comparing General Paradigms on Data Secrecy Protection for Outsourced Files in Mobile Cloud Computing. - Liangli Ma; Jingchun Sun; Yongjie Li 007 (J. Networks, 2012)

Uncovering MicroRNA and Transcription Factor Mediated Regulatory Networks in Glioblastoma. - Jingchun Sun; Xue Gong; Benjamin Purow; Zhongming Zhao (PLoS Comput. Biol., 2012)

Identifying transcription factor and microRNA mediated synergetic regulatory networks in lung cancer. - Ramkrishna Mitra; Jingchun Sun; Min Zhao 006; Zhongming Zhao (BMC Bioinform., 2013)

TSGene: a web resource for tumor suppressor genes. - Min Zhao 006; Jingchun Sun; Zhongming Zhao (Nucleic Acids Res., 2013)

An Integrative Framework for Drug Target Prediction and Repurposing. - Jingchun Sun; Cui Tao; Kevin W. Zhu; W. Jim Zheng; Junjie Chen; Hua Xu 001 (AMIA, 2014)

Using Ontology Fingerprints to Disambiguate Gene Name Entities in the Biomedical Literature. - Guocai Chen; Jieyi Zhao; Trevor Cohen; Cui Tao; Jingchun Sun; Hua Xu 001; Elmer V. Bernstam; Jia Zeng; Amber M. Johnson; Vijaykumar Holla; Ann Balley; Funda Meric-Bernstam; et al. (ICBO, 2014)

Drug Target Prediction for Colorectal Cancer by Combining Ontology and Network Approaches. - Cui Tao; Jingchun Sun; W. Jim Zheng; Junjie Chen; Hua Xu 001 (ICBO, 2014)

Combinatorial therapy discovery using mixed integer linear programming. - Kaifang Pang; Ying-Wooi Wan; William T. Choi; Lawrence A. Donehower; Jingchun Sun; Dhruv Pant; Zhandong Liu (Bioinform., 2014)

Determining molecular predictors of adverse drug reactions with causality analysis based on structure learning. - Mei Liu; Ruichu Cai; Yong Hu 002; Michael E. Matheny; Jingchun Sun; Jun Hu; Hua Xu 001 (J. Am. Medical Informatics Assoc., 2014)

Semantic Web Ontology and Data Integration: a Case Study in Aiding Psychiatric Drug Repurposing. - Chen Liang 005; Jingchun Sun; Cui Tao (MedInfo, 2015)

Using Ontology Fingerprints to disambiguate gene name entities in the biomedical literature. - Guocai Chen; Jieyi Zhao; Trevor Cohen; Cui Tao; Jingchun Sun; Hua Xu 001; Elmer V. Bernstam; Andrew Lawson; Jia Zeng; Amber M. Johnson; Vijaykumar Holla; Ann M. Bailey; et al. (Database J. Biol. Databases Curation, 2015)

Colorectal cancer drug target prediction using ontology-based inference and network analysis. - Cui Tao; Jingchun Sun; W. Jim Zheng; Junjie Chen; Hua Xu 001 (Database J. Biol. Databases Curation, 2015)

A comparative study of disease genes and drug targets in the human protein interactome. - Jingchun Sun; Kevin W. Zhu; W. Jim Zheng; Hua Xu 001 (BMC Bioinform., 2015)

A weighted and integrated drug-target interactome: drug repurposing for schizophrenia as a use case. - Liang-Chin Huang; Ergin Soysal; W. Jim Zheng; Zhongming Zhao; Hua Xu 001; Jingchun Sun (BMC Syst. Biol., 2015)

Deciphering Signaling Pathway Networks to Understand the Molecular Mechanisms of Metformin Action. - Jingchun Sun; Min Zhao 006; Peilin Jia; Lily Wang 001; Yonghui Wu; Carissa Iverson; Yubo Zhou; Erica A. Bowton; Dan M. Roden; Joshua C. Denny; Melinda C. Aldrich; Hua Xu 001; et al. (PLoS Comput. Biol., 2015)

Semantic Web Ontology and Data Integration: a Case Study in Aiding Psychiatric Drug Repurposing. - Chen Liang; Jingchun Sun; Cui Tao (CRI, 2016)

Investigating MicroRNA and transcription factor co-regulatory networks in colorectal cancer. - Hao Wang; Jiamao Luo; Chun Liu; Huilin Niu; Jing Wang 026; Qi Liu 024; Zhongming Zhao; Hua Xu 001; Yanqing Ding; Jingchun Sun; Qingling Zhang 003 (BMC Bioinform., 2017)

A systematic analysis of FDA-approved anticancer drugs. - Jingchun Sun; Qiang Wei 002; Yubo Zhou; Jingqi Wang; Qi Liu 024; Hua Xu 001 (BMC Syst. Biol., 2017)

Research on Whole-Link Risk Situational Awareness Index System and Dynamic Risk Pool Supervision. - Jingchun Sun; Fei Deng; Boya Du (ICNCC, 2022)

Network Intrusion Logit Detection Model with IO Port Cross-Classification. - Jingchun Sun; Fei Deng; Qin Su (Int. J. Pattern Recognit. Artif. Intell., 2022)

An Evolutionary Game of Perception-Based Stochastic User-Equilibrium in a Parallel Network. - Jingchun Sun; Fei Deng; Haoran Fu; Yinfeng Xu (IEEE Trans. Intell. Transp. Syst., 2023)