Database verification studies of SWISS-PROT and GenBank. - Peter D. Karp; Suzanne M. Paley; Jingchun Zhu (Bioinform., 2001)

Comparative Genomics Search for Losses of Long-Established Genes on the Human Lineage. - Jingchun Zhu; J. Zachary Sanborn; Mark Diekhans; Craig B. Lowe; Tom H. Pringle; David Haussler (PLoS Comput. Biol., 2007)

Inference of patient-specific pathway activities from multi-dimensional cancer genomics data using PARADIGM. - Charles J. Vaske; Stephen C. Benz; J. Zachary Sanborn; Dent Earl; Christopher Szeto; Jingchun Zhu; David Haussler; Joshua M. Stuart (Bioinform., 2010)

The UCSC cancer genomics browser: update 2011. - J. Zachary Sanborn; Stephen C. Benz; Brian Craft; Christopher Szeto; Kord M. Kober; Laurence R. Meyer; Charles J. Vaske; Mary Goldman; Kayla E. Smith; Robert M. Kuhn; Donna Karolchik; W. James Kent; et al. (Nucleic Acids Res., 2011)

The UCSC Cancer Genomics Browser: update 2013. - Mary Goldman; Brian Craft; Teresa Swatloski; Kyle Ellrott; Melissa S. Cline; Mark Diekhans; Singer Ma; Chris Wilks; Joshua M. Stuart; David Haussler; Jingchun Zhu (Nucleic Acids Res., 2013)

The UCSC Cancer Genomics Browser: update 2015. - Mary Goldman; Brian Craft; Teresa Swatloski; Melissa S. Cline; Olena Morozova; Mark Diekhans; David Haussler; Jingchun Zhu (Nucleic Acids Res., 2015)

Genomic basis for RNA alterations in cancer. - Claudia Calabrese; Natalie R. Davidson; Deniz Demircioglu; Nuno A. Fonseca; Yao He; André Kahles; Kjong-Van Lehmann; Fenglin Liu; Yuichi Shiraishi; Cameron M. Soulette; Lara Urban; Liliana Greger; et al. (Nat., 2020)