BiRWLGO: A global network-based strategy for lncRNA function annotation using bi-random walk. - Jingpu Zhang; Shuai Zou; Lei Deng 002 (BIBM, 2017)

面向云数据安全存储的分段融合模糊聚类算法 (Segmented Fusion Fuzzy Clustering Algorithm for Cloud Data Security Storage). - Donghong Shan; Yongchang Shi; Weiting Zhao; Jingpu Zhang (计算机科学, 2017)

Exploring Disease Similarity by Integrating Multiple Data Sources. - Lei Deng 002; Danyi Ye; Junmin Zhao; Jingpu Zhang (BIBM, 2018)

Ontological function annotation of long non-coding RNAs through hierarchical multi-label classification. - Jingpu Zhang; Zuping Zhang 001; Zixiang Wang; Yuting Liu; Lei Deng 002 (Bioinform., 2018)

Probing the functions of long non-coding RNAs by exploiting the topology of global association and interaction network. - Lei Deng 002; Hongjie Wu; Chuyao Liu; Weihua Zhan; Jingpu Zhang (Comput. Biol. Chem., 2018)

DKCirc2GO: Predicting Gene Ontology of circRNAs Using Dual KATZ Approach. - Lei Deng 002; Xin Sun; Wei Lin; Jingpu Zhang (BIBM, 2019)

A Protein Complex Identification Algorithm Based on essential protein. - Junmin Zhao; Jingpu Zhang; Bin Yang; Yuanyuan Ma (BIBM, 2019)

A New Rapid Incremental Algorithm for Constructing Concept Lattices. - Jingpu Zhang; Ronghui Liu; Ligeng Zou; Licheng Zeng (Inf., 2019)

MultiSourcDSim: an integrated approach for exploring disease similarity. - Lei Deng 002; Danyi Ye; Junmin Zhao; Jingpu Zhang (BMC Medical Informatics Decis. Mak., 2019)

Integrating Multiple Heterogeneous Networks for Novel LncRNA-Disease Association Inference. - Jingpu Zhang; Zuping Zhang 001; Zhigang Chen 001; Lei Deng 002 (IEEE ACM Trans. Comput. Biol. Bioinform., 2019)

KATZLGO: Large-Scale Prediction of LncRNA Functions by Using the KATZ Measure Based on Multiple Networks. - Zuping Zhang 001; Jingpu Zhang; Chao Fan; Yongjun Tang; Lei Deng 002 (IEEE ACM Trans. Comput. Biol. Bioinform., 2019)

Predict the Protein-protein Interaction between Virus and Host through Hybrid Deep Neural Network. - Lei Deng 002; Jiaojiao Zhao; Jingpu Zhang (BIBM, 2020)

DeepciRGO: functional prediction of circular RNAs through hierarchical deep neural networks using heterogeneous network features. - Lei Deng 002; Wei Lin; Jiacheng Wang; Jingpu Zhang (BMC Bioinform., 2020)

A novel protein complex identifying method based on key protein (PCIM). - Junmin Zhao; Jingpu Zhang; Yuanyuan Ma; Bin Yang (Int. J. Data Min. Bioinform., 2020)

In silico drug repositioning based on the integration of chemical, genomic and pharmacological spaces. - Hailin Chen; Zuping Zhang 001; Jingpu Zhang (BMC Bioinform., 2021)

MSCFS: inferring circRNA functional similarity based on multiple data sources. - Liang Shu; Cheng Zhou; Xinxu Yuan; Jingpu Zhang; Lei Deng 002 (BMC Bioinform., 2021)

LDAH2V: Exploring Meta-Paths Across Multiple Networks for lncRNA-Disease Association Prediction. - Lei Deng 002; Wenkai Li; Jingpu Zhang (IEEE ACM Trans. Comput. Biol. Bioinform., 2021)

Predicting circRNA-drug sensitivity associations via graph attention auto-encoder. - Lei Deng 002; Zixuan Liu; Yurong Qian; Jingpu Zhang (BMC Bioinform., 2022)

ABLNCPP: Attention Mechanism-Based Bidirectional Long Short-Term Memory for Noncoding RNA Coding Potential Prediction. - Lei Deng 002; Ying Jiang; Xiaowen Hu; Rongtao Zheng; Zhijian Huang; Jingpu Zhang (J. Chem. Inf. Model., 2023)

ncRNA Coding Potential Prediction Using BiLSTM and Transformer Encoder-Based Model. - Jingpu Zhang; Hao Lu 010; Ying Jiang; Yuanyuan Ma; Lei Deng (J. Chem. Inf. Model., 2024)

Remote Sensing Image Harmonization Method for Fine-Grained Ship Classification. - Jingpu Zhang; Ziyan Zhong; Xingzhuo Wei; Xianyun Wu; Yunsong Li (Remote. Sens., 2024)

Multi-Modality and Multi-Grained Transformer for Accurate Radiology Report Generation. - Hongzhao Li; Liangzhi Zhang; Xiangrong Zhong; Jingpu Zhang; Shuo Feng; Shupan Li (ICIC (27), 2025)