SEPPA 2.0 - more refined server to predict spatial epitope considering species of immune host and subcellular localization of protein antigen. - Tao Qi; Tianyi Qiu; Qingchen Zhang; Kailin Tang; Yangyang Fan; Jingxuan Qiu; Dingfeng Wu; Wei Zhang; Yanan Chen; Jun Gao; Ruixin Zhu; Zhiwei Cao (Nucleic Acids Res., 2014)

The recent progress in proteochemometric modelling: focusing on target descriptors, cross-term descriptors and application scope. - Tianyi Qiu; Jingxuan Qiu; Jun Feng; Dingfeng Wu; Yiyan Yang; Kailin Tang; Zhiwei Cao; Ruixin Zhu (Briefings Bioinform., 2017)

Finding the molecular scaffold of nuclear receptor inhibitors through high-throughput screening based on proteochemometric modelling. - Tianyi Qiu; Dingfeng Wu; Jingxuan Qiu; Zhiwei Cao (J. Cheminformatics, 2018)

Predicting the Antigenic Relationship of Foot-and-Mouth Disease Virus for Vaccine Selection Through a Computational Model. - Jingxuan Qiu; Tianyi Qiu; Qingli Dong; Dongpo Xu; Xiang Wang; Qi Zhang; Jing Pan; Qing Liu (IEEE ACM Trans. Comput. Biol. Bioinform., 2021)

Checking Transaction Isolation Violations Using Graph Queries. - Stefania Dumbrava; Zhao Jin; Burcu Kulahcioglu Ozkan; Jingxuan Qiu (ICGT, 2024)

GRAIL: Checking Transaction Isolation Violations with Graph Queries. - Stefania Dumbrava; Zhao Jin; Burcu Kulahcioglu Ozkan; Jingxuan Qiu (ICSE Companion, 2024)

Advances in phage-host interaction prediction: in silico method enhances the development of phage therapies. - Wanchun Nie; Tianyi Qiu; Yiwen Wei; Hao Ding; Zhixiang Guo; Jingxuan Qiu (Briefings Bioinform., 2024)

Advances of computational methods enhance the development of multi-epitope vaccines. - Yiwen Wei; Tianyi Qiu; Yisi Ai; Yuxi Zhang; Junting Xie; Dong Zhang; Xiaochuan Luo; Xiulan Sun; Xin Wang; Jingxuan Qiu (Briefings Bioinform., 2024)

PbsNRs: predict the potential binders and scaffolds for nuclear receptors. - Genhui Zheng; Dingfeng Wu; Xiuxia Wei; Dongpo Xu; Tiantian Mao; Deyu Yan; Wenhao Han; Xiaoxiao Shang; Zikun Chen; Jingxuan Qiu; Kailin Tang; Zhiwei Cao; et al. (Briefings Bioinform., 2024)

PB-LKS: a python package for predicting phage-bacteria interaction through local K-mer strategy. - Jingxuan Qiu; Wanchun Nie; Hao Ding; Jia Dai; Yiwen Wei; Dezhi Li; Yuxi Zhang; Junting Xie; Xinxin Tian; Nannan Wu; Tianyi Qiu (Briefings Bioinform., 2024)