A Wavelet Approach for the Analysis of Folding Trajectory of Protein Trp-cage. - Lei Ye; Huajun Chen; Ting Liu; Zhaohui Wu 001; Jingyuan Li 001; Ruhong Zhou (J. Bioinform. Comput. Biol., 2005)

Free energy simulations reveal a double mutant avian H5N1 virus hemagglutinin with altered receptor binding specificity. - Payel Das; Jingyuan Li 001; Ajay K. Royyuru; Ruhong Zhou (J. Comput. Chem., 2009)

Predicting the Dynamic Interaction of Intrinsically Disordered Proteins. - Yuchuan Zheng; Qixiu Li; Maria I. Freiberger; Haoyu Song; Guorong Hu; Moxin Zhang; Ruo-Xu Gu; Jingyuan Li 001 (J. Chem. Inf. Model., 2024)

TIDGN: A Transfer Learning Framework for Predicting Interactions of Intrinsically Disordered Proteins with High Conformational Dynamics. - Jing Xiao; Guorong Hu; Xiaozhou Zhou; Yuchuan Zheng; Jingyuan Li 001 (J. Chem. Inf. Model., 2025)

Link node: A method to characterize the chain topology of intrinsically disordered proteins. - Danqi Lang; Le Chen; Moxin Zhang; Haoyu Song; Jingyuan Li 001 (Quant. Biol., 2025)