GOLEM - Multimedia Simulator for Medical Education. - Jirí Kofránek; Luu Danh Anh Vu; Hana Snáselová; Roman Kerekes; Tomás Velan (MedInfo, 2001)

From Simulation Chips to Biomedical Simulators. - Jirí Kofránek; Michal Andrlík; Tomás Kripner; Jan Masek (ESM, 2002)

Sound localization at high frequencies and across the frequency range. - Petr Marsalek; Jirí Kofránek (Neurocomputing, 2004)

The Atlas of Physiology and Pathophysiology: Web-based multimedia enabled interactive simulations. - Jirí Kofránek; Stanislav Matousek; Jan Rusz; Petr Stodulka; Pavol Privitzer; Marek Matejak; Martin Tribula (Comput. Methods Programs Biomed., 2011)

Parameter estimation of complex mathematical models of human physiology using remote simulation distributed in scientific cloud. - Tomás Kulhánek; Marek Matejak; Jan Silar; Jirí Kofránek (BHI, 2014)

Modeling of short-term mechanism of arterial pressure control in the cardiovascular system: Object-oriented and acausal approach. - Tomás Kulhánek; Jirí Kofránek; Marek Matejak (Comput. Biol. Medicine, 2014)

Surviving sepsis - a 3D integrative educational simulator. - Filip Jezek; Martin Tribula; Tomás Kulhánek; Marek Matejak; Pavol Privitzer; Jan Silar; Jirí Kofránek; Lenka Lhotská (EMBC, 2015)

Experiences in teaching of modeling and simulation with emphasize on equation-based and acausal modeling techniques. - Tomás Kulhánek; Filip Jezek; Marek Matejak; Jan Silar; Jirí Kofránek (EMBC, 2015)

Physiomodel - an integrative physiology in Modelica. - Marek Matejak; Jirí Kofránek (EMBC, 2015)

Integrative physiology in Modelica. - Jirí Kofránek; Tomás Kulhánek; Marek Mateják; Filip Jezek; Jan Silar (Modelica, 2017)

PDEModelica and Breathing in an Avalanche. - Jan Silar; Filip Jezek; Jirí Kofránek (Modelica, 2017)

Model visualization for e-learning, Kidney simulator for medical students. - Jan Silar; Filip Jezek; Arnost Mládek; David Polák; Jirí Kofránek (Modelica, 2019)

Experience with Teaching Different Modeling Techniques on the example of Glucose Insulin Regulation Model. - Tomás Kulhánek; Jirí Kofránek (EMBC, 2020)

Using process model to define the legislative framework of electronic prescription in the Czech Republic. - Jirí Berger; Jan Bruthans; Vojtech Adam; Jirí Kofránek (Health Informatics J., 2024)