ECQ: A Simple Query Language for the Semantic Web. - María del Mar Roldán García; Joaquin J. Molina-Castro; José Francisco Aldana Montes (DEXA Workshops, 2008)

A Protégé Plugin for Querying and Reasoning on Persistent OWL Ontologies. - María del Mar Roldán García; Joaquin J. Molina-Castro; José Francisco Aldana Montes (SWAP, 2008)

KASBi: Knowledge-Based Analysis in Systems Biology. - María del Mar Roldán García; Ismael Navas-Delgado; Amine Kerzazi; Othmane Chniber; Joaquin J. Molina-Castro; José Francisco Aldana Montes (SWAT4LS, 2008)

KA-SB: from data integration to large scale reasoning. - María del Mar Roldán García; Ismael Navas-Delgado; Amine Kerzazi; Othmane Chniber; Joaquin J. Molina-Castro; José Francisco Aldana Montes (BMC Bioinform., 2009)

TasTicWiki: A Semantic Wiki with Content Recommendation. - Manuela Ruiz-Montiel; Joaquin J. Molina-Castro; José Francisco Aldana Montes (SemWiki@ESWC, 2010)