The HAMP Signal Relay Domain Adopts Multiple Conformational States through Collective Piston and Tilt Motions. - Lizhe Zhu; Peter G. Bolhuis; Jocelyne Vreede (PLoS Comput. Biol., 2013)

Multiscale Approach to the Determination of the Photoactive Yellow Protein Signaling State Ensemble. - Mary A. Rohrdanz; Wenwei Zheng; Bradley Lambeth; Jocelyne Vreede; Cecilia Clementi (PLoS Comput. Biol., 2014)

The Trigger Factor Chaperone Encapsulates and Stabilizes Partial Folds of Substrate Proteins. - Kushagra Singhal; Jocelyne Vreede; Alireza Mashaghi; Sander J. Tans; Peter G. Bolhuis (PLoS Comput. Biol., 2015)

Predicting the mechanism and rate of H-NS binding to AT-rich DNA. - Enrico Riccardi; Eva C. van Mastbergen; William Wiley Navarre; Jocelyne Vreede (PLoS Comput. Biol., 2019)

Sequence dependence of transient Hoogsteen base pairing in DNA. - Alberto Pérez de Alba Ortíz; Jocelyne Vreede; Bernd Ensing (PLoS Comput. Biol., 2022)