A Probabilistic Graphical Model for Ab Initio Folding. - Feng Zhao; Jian Peng 001; Joe DeBartolo; Karl F. Freed; Tobin R. Sosnick; Jinbo Xu (RECOMB, 2009)

A Probabilistic and Continuous Model of Protein Conformational Space for Template-Free Modeling. - Feng Zhao; Jian Peng 001; Joe DeBartolo; Karl F. Freed; Tobin R. Sosnick; Jinbo Xu (J. Comput. Biol., 2010)

Genome-Wide Prediction and Validation of Peptides That Bind Human Prosurvival Bcl-2 Proteins. - Joe DeBartolo; Mikko Taipale; Amy E. Keating (PLoS Comput. Biol., 2014)