CASTp: computed atlas of surface topography of proteins with structural and topographical mapping of functionally annotated residues. - Joe Dundas; Zheng Ouyang; Jeffery Tseng; T. Andrew Binkowski; Yaron Turpaz; Jie Liang 002 (Nucleic Acids Res., 2006)

Topology independent protein structural alignment. - Joe Dundas; T. Andrew Binkowski; Bhaskar DasGupta; Jie Liang 002 (BMC Bioinform., 2007)