FORRepeats: detects repeats on entire chromosomes and between genomes. - Arnaud Lefebvre; Thierry Lecroq; Hélène Dauchel; Joël Alexandre (Bioinform., 2003)

An Improved Algorithm for Finding Longest Repeats with a Modified Factor Oracle. - Arnaud Lefebvre; Thierry Lecroq; Joël Alexandre (J. Autom. Lang. Comb., 2003)

Extracting approximate patterns. - Johann Pelfrêne; Saïd Abdeddaïm; Joël Alexandre (J. Discrete Algorithms, 2005)