MORMIN: A quasi-Newtonian energy minimizer fitting the nuclear overhauser data. - Joël Pothier; Jacques Gabarro-Arpa; Marc Le Bret (J. Comput. Chem., 1993)

Finding flexible patterns in a text: an application to three-dimensional molecular matching. - Marie-France Sagot; Alain Viari; Joël Pothier; Henry Soldano (Comput. Appl. Biosci., 1995)

P-SEA: a new efficient assignment of secondary structure from C alpha trace of proteins. - Gilles Labesse; N. Colloc'h; Joël Pothier; J. P. Mornon (Comput. Appl. Biosci., 1997)

Pairwide and Multiple Identification of Three-Dimensional Common Substructures in Proteins. - V. Escalier; Joël Pothier; Henry Soldano; Alain Viari (J. Comput. Biol., 1998)

Syntons, metabolons and interactons: an exact graph-theoretical approach for exploring neighbourhood between genomic and functional data. - Frédéric Boyer; Anne Morgat; Laurent Labarre; Joël Pothier; Alain Viari (Bioinform., 2005)

RPBS: a web resource for structural bioinformatics. - C. Alland; François Moreews; D. Boens; Mathilde Carpentier; S. Chiusa; Mathieu Lonquety; N. Renault; Y. Wong; Hubert Cantalloube; Jacques Chomilier; Joëlle Hochez; Joël Pothier; et al. (Nucleic Acids Res., 2005)

Swelfe: a detector of internal repeats in sequences and structures. - Anne-Laure Abraham; Eduardo P. C. Rocha; Joël Pothier (Bioinform., 2008)

Protein evolution driven by symmetric structural repeats. - Anne-Laure Abraham; Joël Pothier; Eduardo P. C. Rocha (BMC Bioinform., 2008)

A Relational Extension of the Notion of Motifs: Application to the Common 3D Protein Substructures Searching Problem. - Nadia Pisanti; Henry Soldano; Mathilde Carpentier; Joël Pothier (J. Comput. Biol., 2009)

Use of ternary similarities in graph based clustering for protein structural family classification. - Guillaume Santini; Henry Soldano; Joël Pothier (BCB, 2010)

Automatic classification of protein structures relying on similarities between alignments. - Guillaume Santini; Henry Soldano; Joël Pothier (BMC Bioinform., 2012)