DLRS: gene tree evolution in light of a species tree. - Joel Sjöstrand; Bengt Sennblad; Lars Arvestad; Jens Lagergren (Bioinform., 2012)

Genome-wide probabilistic reconciliation analysis across vertebrates. - Owais Mahmudi; Joel Sjöstrand; Bengt Sennblad; Jens Lagergren (BMC Bioinform., 2013)

GenPhyloData: realistic simulation of gene family evolution. - Joel Sjöstrand; Lars Arvestad; Jens Lagergren; Bengt Sennblad (BMC Bioinform., 2013)

Reconciling gene family evolution and species evolution. - Joel Sjöstrand (2013)

ST Pipeline: an automated pipeline for spatial mapping of unique transcripts. - José Fernández Navarro; Joel Sjöstrand; Fredrik Salmén; Joakim Lundeberg; Patrik L. Ståhl (Bioinform., 2017)

VMCMC: a graphical and statistical analysis tool for Markov chain Monte Carlo traces. - Raja Ali; Mikael Bark; Jorge Miró; Sayyed Muhammad; Joel Sjöstrand; Syed M. Zubair; Raja M. Abbas; Lars Arvestad (BMC Bioinform., 2017)