Stochastic reaction-diffusion simulation with MesoRD. - Johan Hattne; David Fange; Johan Elf (Bioinform., 2005)

What Makes Ribosome-Mediated Transcriptional Attenuation Sensitive to Amino Acid Limitation? - Johan Elf; Måns Ehrenberg (PLoS Comput. Biol., 2005)

Noise-Induced Min Phenotypes in E. coli. - David Fange; Johan Elf (PLoS Comput. Biol., 2006)

MesoRD 1.0: Stochastic reaction-diffusion simulations in the microscopic limit. - David Fange; Anel Mahmutovic; Johan Elf (Bioinform., 2012)

An Evaluation of the Faster STORM Method for Super-resolution Microscopy. - Omer Ishaq; Johan Elf; Carolina Wählby (ICPR, 2014)

Simulated single molecule microscopy with SMeagol. - Martin Lindén; Vladimir Curic; Alexis Boucharin; David Fange; Johan Elf (Bioinform., 2016)

Segmentation and Track-Analysis in Time-Lapse Imaging of Bacteria. - Sajith Kecheril Sadanandan; Ozden Baltekin; Klas E. G. Magnusson; Alexis Boucharin; Petter Ranefall; Joakim Jaldén; Johan Elf; Carolina Wählby (IEEE J. Sel. Top. Signal Process., 2016)

Label-free deep learning-based species classification of bacteria imaged by phase-contrast microscopy. - Erik Hallström; Vinodh Kandavalli; Petter Ranefall; Johan Elf; Carolina Wählby (PLoS Comput. Biol., 2023)