Visualising dynamic memory allocators. - Andrew M. Cheadle; A. J. Field; J. W. Ayres; Neil Dunn; Richard A. Hayden; Johan Nyström-Persson (ISMM, 2006)

A method specialisation and virtualised execution environment for Java. - Andrew M. Cheadle; A. J. Field; Johan Nyström-Persson (VEE, 2008)

Plug&manage heterogeneous sensing devices. - Levent Gürgen; Johan Nyström-Persson; Amin Cherbal; Cyril Labbé; Claudia Roncancio; Shinichi Honiden (DMSN, 2009)

Poplar: A Java Extension for Evolvable Component Integration - Johan Nyström-Persson; Shinichi Honiden (CoRR, 2011)

An Open Framework for Extensible Multi-stage Bioinformatics Software. - Gabriel Keeble-Gagnère; Johan Nyström-Persson; Matthew I. Bellgard; Kenji Mizuguchi (PRIB, 2012)

YummyData: Measuring the "Sparkliness" of Biomedical Sparql Endpoints. - Andrea Splendiani; Johan Nyström-Persson; Michel Dumontier; Yasunori Yamamoto (SWAT4LS, 2012)

Toxygates: interactive toxicity analysis on a hybrid microarray and linked data platform. - Johan Nyström-Persson; Yoshinobu Igarashi; Maori Ito; Mizuki Morita; Noriyuki Nakatsu; Hiroshi Yamada; Kenji Mizuguchi (Bioinform., 2013)

Compact and evenly distributed k-mer binning for genomic sequences. - Johan Nyström-Persson; Gabriel Keeble-Gagnère; Niamat Zawad (Bioinform., 2021)