The Diatom EST Database. - Uma Maheswari; Anton Montsant; Johannes Goll; S. Krishnasamy; K. R. Rajyashri; Villoo Morawala Patell; Chris Bowler (Nucleic Acids Res., 2005)

Learning from Positive and Unlabeled Documents for Retrieval of Bacterial Protein-Protein Interaction Literature. - Hongfang Liu; Manabu Torii; Guixian Xu; Zhang-Zhi Hu; Johannes Goll (BioLINK@ISMB/ECCB, 2008)

MPIDB: the microbial protein interaction database. - Johannes Goll; Seesandra V. Rajagopala; Shen C. Shiau; Hank Wu; Brian T. Lamb; Peter Uetz (Bioinform., 2008)

MPI-LIT: a literature-curated dataset of microbial binary protein–protein interactions. - Seesandra V. Rajagopala; Johannes Goll; N. D. Deve Gowda; Kumar C. Sunil; Björn Titz; Arnab Mukherjee; Sharmila S. Mary; Naresh Raviswaran; Chetan S. Poojari; Srinivas Ramachandra; Svetlana Shtivelband; Stephen M. Blazie; et al. (Bioinform., 2008)

METAREP: JCVI metagenomics reports - an open source tool for high-performance comparative metagenomics. - Johannes Goll; Douglas B. Rusch; David M. Tanenbaum; Mathangi Thiagarajan; Kelvin Li; Barbara A. Methé; Shibu Yooseph (Bioinform., 2010)

Classification Systems for Bacterial Protein-Protein Interaction Document Retrieval. - Hongfang Liu; Manabu Torii; Guixian Xu; Johannes Goll (Int. J. Comput. Model. Algorithms Medicine, 2010)

The Protein Naming Utility: a rules database for protein nomenclature. - Johannes Goll; Robert Montgomery; Lauren M. Brinkac; Seth A. Schobel; Derek M. Harkins; Yinong Sebastian; Susmita Shrivastava; A. Scott Durkin; Granger G. Sutton (Nucleic Acids Res., 2010)

Metabolic Reconstruction for Metagenomic Data and Its Application to the Human Microbiome. - Sahar Abubucker; Nicola Segata; Johannes Goll; Alyxandria M. Schubert; Jacques Izard; Brandi L. Cantarel; Beltran Rodriguez-Mueller; Jeremy Zucker; Mathangi Thiagarajan; Bernard Henrissat; Owen White; Scott T. Kelley; et al. (PLoS Comput. Biol., 2012)

A new reference implementation of the PSICQUIC web service. - Noemi del-Toro; Marine Dumousseau; Sandra E. Orchard; Rafael C. Jiménez; Eugenia Galeota; Guillaume Launay; Johannes Goll; Karin Breuer; Keiichiro Ono; Lukasz Salwínski; Henning Hermjakob (Nucleic Acids Res., 2013)