Fast and accurate read alignment for resequencing. - John C. Mu; Hui Jiang 002; Amirhossein Kiani; Marghoob Mohiyuddin; Narges Bani Asadi; Wing Hung Wong (Bioinform., 2012)

MetaSV: an accurate and integrative structural-variant caller for next generation sequencing. - Marghoob Mohiyuddin; John C. Mu; Jian Li; Narges Bani Asadi; Mark B. Gerstein; Alexej Abyzov; Wing H. Wong; Hugo Y. K. Lam (Bioinform., 2015)

VarSim: a high-fidelity simulation and validation framework for high-throughput genome sequencing with cancer applications. - John C. Mu; Marghoob Mohiyuddin; Jian Li; Narges Bani Asadi; Mark B. Gerstein; Alexej Abyzov; Wing H. Wong; Hugo Y. K. Lam (Bioinform., 2015)

LongISLND: in silico sequencing of lengthy and noisy datatypes. - Bayo Lau; Marghoob Mohiyuddin; John C. Mu; Li Tai Fang; Narges Bani Asadi; Carolina Dallett; Hugo Y. K. Lam (Bioinform., 2016)