Accelerating in silico research with workflows: A lesson in Simplicity. - Paul Walsh; John Carroll 003; Roy D. Sleator (Comput. Biol. Medicine, 2013)

Simplicity - Enabling a rapid route to publication. - Paul Walsh; John Carroll 003 (BIBM, 2014)

HBLAST: Parallelised sequence similarity - A Hadoop MapReducable basic local alignment search tool. - Aisling O'Driscoll; Vladislav Belogrudov; John Carroll 003; Kai Kropp; Paul Walsh; Peter Ghazal; Roy D. Sleator (J. Biomed. Informatics, 2015)