A Quick Introduction to Version Control with Git and GitHub. - John D. Blischak; Emily R. Davenport; Greg Wilson (PLoS Comput. Biol., 2016)

Creating and sharing reproducible research code the workflowr way. - John D. Blischak; Peter Carbonetto; Matthew Stephens (F1000Research, 2019)

OmicNavigator: open-source software for the exploration, visualization, and archival of omic studies. - Terrence R. Ernst; John D. Blischak; Paul Nordlund; Joe Dalen; Justin Moore; Akshay Bhamidipati; Pankaj Dwivedi; Joe LoGrasso; Marco Rocha Curado; Brett Warren Engelmann (BMC Bioinform., 2024)