Functional Connectivity: Integrating Behavioral, Diffusion Tensor Imaging, and Functional Magnetic Resonance Imaging Data Sets. - Abigail A. Baird; Mary K. Colvin; John Darrell Van Horn; Souheil J. Inati; Michael S. Gazzaniga (J. Cogn. Neurosci., 2005)

Consequences, Action, and Intention as Factors in Moral Judgments: An fMRI Investigation. - Jana Schaich Borg; Catherine Hynes; John D. Van Horn; Scott T. Grafton; Walter Sinnott-Armstrong (J. Cogn. Neurosci., 2006)

Alcohol-induced suppression of BOLD activity during goal-directed visuomotor performance. - John Darrell Van Horn; Melana Yanos; Paul J. Schmitt; Scott T. Grafton (NeuroImage, 2006)

Mapping the Human Brain: New Insights from fMRI Data Sharing. - John Darrell Van Horn; Alumit Ishai (Neuroinformatics, 2007)

Neuroimaging Data Provenance Using the LONI Pipeline Workflow Environment. - Allan MacKenzie-Graham; Arash Payan; Ivo D. Dinov; John D. Van Horn; Arthur W. Toga (IPAW, 2008)

Neural substrates of visuomotor learning based on improved feedback control and prediction. - Scott T. Grafton; Paul J. Schmitt; John D. Van Horn; Jörn Diedrichsen (NeuroImage, 2008)

Provenance in neuroimaging. - Allan MacKenzie-Graham; John D. Van Horn; Roger P. Woods; Karen L. Crawford; Arthur W. Toga (NeuroImage, 2008)

Domain-Specific Data Sharing in Neuroscience: What Do We Have to Learn from Each Other? - John Darrell Van Horn; Catherine A. Ball (Neuroinformatics, 2008)

Computational NeuroInformatics - From Database to Biomarker. - Arthur W. Toga; John D. Van Horn; John C. Mazziotta (BIOCOMP, 2009)

MRI Resolution Enhancement Using Total Variation Regularization. - Shantanu H. Joshi; Antonio Marquina; Stanley J. Osher; Ivo D. Dinov; John D. Van Horn; Arthur W. Toga (ISBI, 2009)

Edge-Enhanced Image Reconstruction Using (TV) Total Variation and Bregman Refinement. - Shantanu H. Joshi; Antonio Marquina; Stanley J. Osher; Ivo D. Dinov; John D. Van Horn; Arthur W. Toga (SSVM, 2009)

Efficient, distributed and interactive neuroimaging data analysis using the LONI pipeline. - Ivo D. Dinov; John D. Van Horn; Kamen Lozev; Rico Magsipoc; Petros Petrosyan; Zhizhong Liu; Allan MacKenzie-Graham; Paul R. Eggert; Douglas Stott Parker; Arthur W. Toga (Frontiers Neuroinformatics, 2009)

Neuroimaging workflow design and data-mining: a Frontiers in Neuroinformatics special issue. - John D. Van Horn; Arthur W. Toga (Frontiers Neuroinformatics, 2009)

Interactive exploration of neuroanatomical meta-spaces. - Shantanu H. Joshi; John D. Van Horn; Arthur W. Toga (Frontiers Neuroinformatics, 2009)

Is it time to re-prioritize neuroimaging databases and digital repositories? - John Darrell Van Horn; Arthur W. Toga (NeuroImage, 2009)

Unique and persistent individual patterns of brain activity across different memory retrieval tasks. - Michael B. Miller; Christa-Lynn Donovan; John D. Van Horn; Elaine German; Peter Sokol-Hessner; George L. Wolford (NeuroImage, 2009)

Large-scale neuroanatomical visualization using a manifold embedding approach. - Shantanu H. Joshi; Ian Bowman; John D. Van Horn (IEEE VAST, 2010)

Tetrahedral mesh generation for medical images with multiple regions using active surfaces. - Carl Lederman; Anand A. Joshi; Ivo D. Dinov; John D. Van Horn; Luminita A. Vese; Arthur W. Toga (ISBI, 2010)

Visual mining of neuro-metaspaces. - Shantanu H. Joshi; Ian Bowman; Robin Jennings; David Hasson; Zhizhong Liu; Arthur W. Toga; John D. Van Horn (SIGGRAPH Posters, 2010)

LONI MiND: Metadata in NIfTI for DWI. - Vishal Patel; Ivo D. Dinov; John D. Van Horn; Paul M. Thompson; Arthur W. Toga (NeuroImage, 2010)

Fast edge-filtered image upsampling. - Shantanu H. Joshi; Antonio Marquina; Stanley J. Osher; Ivo D. Dinov; Arthur W. Toga; John D. Van Horn (ICIP, 2011)

Query-based coordinated multiple views with Feature Similarity Space for visual analysis of MRI repositories. - Ian Bowman; Shantanu H. Joshi; John Darrell Van Horn (IEEE VAST, 2011)

Brain pattern analysis of cortical valued distributions. - Shantanu H. Joshi; Ian Bowman; Arthur W. Toga; John D. Van Horn (ISBI, 2011)

Geometric Metamorphosis. - Marc Niethammer; Gabriel L. Hart; Danielle F. Pace; Paul M. Vespa; Andrei Irimia; John D. Van Horn; Stephen R. Aylward (MICCAI (2), 2011)

Visual navigation and classification of datasets in feature similarity space. - Ian Bowman; Shantanu H. Joshi; John D. Van Horn (SIGGRAPH Posters, 2011)

Applications of the Pipeline Environment for Visual Informatics and Genomics Computations. - Ivo D. Dinov; Federica Torri; Fabio Macciardi; Petros Petrosyan; Zhizhong Liu; Alen Zamanyan; Paul R. Eggert; Jonathan Pierce; Alex Genco; James A. Knowles; Andrew P. Clark; John D. Van Horn; et al. (BMC Bioinform., 2011)

Quantitative in vivo evidence for broad regional gradients in the timing of white matter maturation during adolescence. - John B. Colby; John D. Van Horn; Elizabeth R. Sowell (NeuroImage, 2011)

The generation of tetrahedral mesh models for neuroanatomical MRI. - Carl Lederman; Anand A. Joshi; Ivo D. Dinov; Luminita A. Vese; Arthur W. Toga; John Darrell Van Horn (NeuroImage, 2011)

Resting-state fMRI can reliably map neural networks in children. - Moriah E. Thomason; Emily L. Dennis; Anand A. Joshi; Shantanu H. Joshi; Ivo D. Dinov; Catie Chang; Melissa L. Henry; Rebecca F. Johnson; Paul M. Thompson; Arthur W. Toga; Gary H. Glover; John D. Van Horn; et al. (NeuroImage, 2011)

Feature-similarity visualization of MRI cortical surface data. - Ian Bowman; Shantanu H. Joshi; Vaughan Greer; John Darrell Van Horn (IEEE VAST, 2012)

Segmentation of serial MRI of TBI patients using personalized atlas construction and topological change estimation. - Bo Wang 019; Marcel Prastawa; Suyash P. Awate; Andrei Irimia; Micah C. Chambers; Paul M. Vespa; John D. Van Horn; Guido Gerig (ISBI, 2012)

A patient-specific segmentation framework for longitudinal MR images of traumatic brain injury. - Bo Wang 019; Marcel Prastawa; Andrei Irimia; Micah C. Chambers; Paul M. Vespa; John D. Van Horn; Guido Gerig (Image Processing, 2012)

Visual Systems for Interactive Exploration and Mining of Large-Scale Neuroimaging Data Archives. - Ian Bowman; Shantanu H. Joshi; John D. Van Horn (Frontiers Neuroinformatics, 2012)

The UCLA multimodal connectivity database: a web-based platform for brain connectivity matrix sharing and analysis. - Jesse A. Brown; Jeffrey D. Rudie; Anita E. Bandrowski; John D. Van Horn; Susan Y. Bookheimer (Frontiers Neuroinformatics, 2012)

Electronic Data Capture, Representation, and Applications for Neuroimaging. - Jessica A. Turner; John Darrell Van Horn (Frontiers Neuroinformatics, 2012)

The Center for Computational Biology: resources, achievements, and challenges. - Arthur W. Toga; Ivo D. Dinov; Paul M. Thompson; Roger P. Woods; John D. Van Horn; David W. Shattuck; Douglas Stott Parker Jr. (J. Am. Medical Informatics Assoc., 2012)

Circular representation of human cortical networks for subject and population-level connectomic visualization. - Andrei Irimia; Micah C. Chambers; Carinna M. Torgerson; John D. Van Horn (NeuroImage, 2012)

Source cancellation profiles of electroencephalography and magnetoencephalography. - Andrei Irimia; John Darrell Van Horn; Eric Halgren (NeuroImage, 2012)

Study factors influencing ventricular enlargement in schizophrenia: A 20 year follow-up meta-analysis. - Angelo Sayo; Robin Jennings; John Darrell Van Horn (NeuroImage, 2012)

Publication Bias in Neuroimaging Research: Implications for Meta-Analyses. - Robin Jennings; John D. Van Horn (Neuroinformatics, 2012)

High-resolution electroencephalographic forward modeling in traumatic brain injury using the finite element method. - S. Y. Matt Goh; Andrei Irimia; Carinna M. Torgerson; Ron Kikinis; Paul M. Vespa; John D. Van Horn (ISBI, 2013)

Graphical data mining of human cortical surface morphometry. - John D. Van Horn; Shantanu H. Joshi; Ian Bowman (ISBI, 2013)

Analyzing imaging biomarkers for traumatic brain injury using 4d modeling of longitudinal MRI. - Bo Wang 019; Marcel Prastawa; Andrei Irimia; Micah C. Chambers; Neda Sadeghi; Paul M. Vespa; John D. Van Horn; Guido Gerig (ISBI, 2013)

Modeling 4D Changes in Pathological Anatomy Using Domain Adaptation: Analysis of TBI Imaging Using a Tumor Database. - Bo Wang 019; Marcel Prastawa; Avishek Saha; Suyash P. Awate; Andrei Irimia; Micah C. Chambers; Paul M. Vespa; John D. Van Horn; Valerio Pascucci; Guido Gerig (MBIA, 2013)

Why share data? Lessons learned from the fMRIDC. - John Darrell Van Horn; Michael S. Gazzaniga (NeuroImage, 2013)

The structural, connectomic and network covariance of the human brain. - Andrei Irimia; John D. Van Horn (NeuroImage, 2013)

Pushing the limits of in vivo diffusion MRI for the Human Connectome Project. - Kawin Setsompop; R. Kimmlingen; E. Eberlein; Thomas Witzel; Julien Cohen-Adad; Jennifer A. McNab; Boris Keil; M. Dylan Tisdall; P. Hoecht; Peter Dietz; Stephen F. Cauley; V. Tountcheva; et al. (NeuroImage, 2013)

Multimodal Deformable Registration of Traumatic Brain Injury MR Volumes via the Bhattacharyya Distance. - Yifei Lou; Andrei Irimia; Patricio A. Vela; Micah C. Chambers; John D. Van Horn; Paul M. Vespa; Allen R. Tannenbaum (IEEE Trans. Biomed. Eng., 2013)

4D active cut: An interactive tool for pathological anatomy modeling. - Bo Wang 019; Wei Liu 036; Marcel Prastawa; Andrei Irimia; Paul M. Vespa; John D. Van Horn; P. Thomas Fletcher; Guido Gerig (ISBI, 2014)

High-throughput neuroimaging-genetics computational infrastructure. - Ivo D. Dinov; Petros Petrosyan; Zhizhong Liu; Paul R. Eggert; Sam Hobel; Seok Woo Moon; John D. Van Horn; Joe Franco; Arthur W. Toga (Frontiers Neuroinformatics, 2014)

Neuroinformatics challenges to the structural, connectomic, functional and electrophysiological multimodal imaging of human traumatic brain injury. - S. Y. Matt Goh; Andrei Irimia; Carinna M. Torgerson; John D. Van Horn (Frontiers Neuroinformatics, 2014)

A case study in connectomics: the history, mapping, and connectivity of the claustrum. - Carinna Margaret Torgerson; John Darrell Van Horn (Frontiers Neuroinformatics, 2014)

Interoperable atlases of the human brain. - Katrin Amunts; Michael Hawrylycz; David C. Van Essen; John D. Van Horn; Noam Harel; Jean-Baptiste Poline; Federico De Martino; Jan G. Bjaalie; Ghislaine Dehaene-Lambertz; Stanislas Dehaene; Pedro A. Valdés-Sosa; Bertrand Thirion; et al. (NeuroImage, 2014)

Quality Control Considerations for the Effective Integration of Neuroimaging Data. - Sumiko Abe; Andrei Irimia; John Darrell Van Horn (DILS, 2015)

Integration of Multimodal Neuroimaging and Electroencephalography for the Study of Acute Epileptiform Activity After Traumatic Brain Injury. - Andrei Irimia; Sheng-Yang M. Goh; Paul M. Vespa; John D. Van Horn (DILS, 2015)

Integration of Behavioral, Structural, Functional, and Genetic Data for the Study of Autism Spectrum Disorders. - Carinna M. Torgerson; Andrei Irimia; S.-Y. Matthew Goh; John D. Van Horn (DILS, 2015)

Going beyond the current neuroinformatics infrastructure. - Xi Cheng; Daniel S. Marcus; John D. Van Horn; Qian Luo; Venkata S. Mattay; Daniel R. Weinberger (Frontiers Neuroinformatics, 2015)

Big biomedical data as the key resource for discovery science. - Arthur W. Toga; Ian T. Foster; Carl Kesselman; Ravi K. Madduri; Kyle Chard; Eric W. Deutsch; Nathan D. Price 001; Gustavo Glusman; Benjamin D. Heavner; Ivo D. Dinov; Joseph Ames; John D. Van Horn; et al. (J. Am. Medical Informatics Assoc., 2015)

Scale-Dependent Variability and Quantitative Regimes in Graph-Theoretic Representations of Human Cortical Networks. - Andrei Irimia; John Darrell Van Horn (Brain Connect., 2016)

Modeling 4D pathological changes by leveraging normative models. - Bo Wang 019; Marcel Prastawa; Andrei Irimia; Avishek Saha; Wei Liu 036; Sheng-Yang M. Goh; Paul M. Vespa; John D. Van Horn; Guido Gerig (Comput. Vis. Image Underst., 2016)

A Unified Variational Volume Registration Method Based on Automatically Learned Brain Structures. - Carl Lederman; Anand A. Joshi; Ivo D. Dinov; John Darrell Van Horn; Luminita A. Vese; Arthur W. Toga (J. Math. Imaging Vis., 2016)

Connected brains and minds - The UMCD repository for brain connectivity matrices. - Jesse A. Brown; John D. Van Horn (NeuroImage, 2016)

Sharing the wealth: Neuroimaging data repositories. - Simon B. Eickhoff; Thomas E. Nichols; John D. Van Horn; Jessica A. Turner (NeuroImage, 2016)

MGH-USC Human Connectome Project datasets with ultra-high b-value diffusion MRI. - Qiuyun Fan; Thomas Witzel; Aapo Nummenmaa; Koene R. A. Van Dijk; John D. Van Horn; Michelle K. Drews; Leah H. Somerville; Margaret A. Sheridan; Rosario M. Santillana; Jenna Snyder; Trey Hedden; Emily E. Shaw; et al. (NeuroImage, 2016)

Opinion: Big data biomedicine offers big higher education opportunities. - John Darrell Van Horn (Proc. Natl. Acad. Sci. USA, 2016)

The BD2K Training Coordinating Center's Data Science Education Platform. - José Luis Ambite; Lily T. Fierro; Florian Geigl; Jonathan Gordon 001; Gully A. P. C. Burns; Kristina Lerman; Jeana Kamdar; Crystal Stewart; Avnish Bhattrai; Xiaoyu Lei; Sumiko Abe; John D. Van Horn (AMIA, 2017)

The Training of Next Generation Data Scientists in Biomedicine. - Lana X. Garmire; Stephen V. Gliske; Quynh C. Nguyen; Jonathan H. Chen; Shamim Nemati; John D. Van Horn; Jason H. Moore; Carol Shreffler; Michelle Dunn (PSB, 2017)

BD2K ERuDIte: the Educational Resource Discovery Index for Data Science. - José Luis Ambite; Lily Fierro; Florian Geigl; Jonathan Gordon 001; Gully A. P. C. Burns; Kristina Lerman; John D. Van Horn (WWW (Companion Volume), 2017)

Brain Extraction from Normal and Pathological Images: A Joint PCA/Image-Reconstruction Approach. - Xu Han 009; Roland Kwitt; Stephen R. Aylward; Bjoern H. Menze; Alexander Asturias; Paul M. Vespa; John D. Van Horn; Marc Niethammer (CoRR, 2017)

Envisioning the future of 'big data' biomedicine. - Alex A. T. Bui; John Darrell Van Horn; N. I. H. BD2K Centers Consortium (J. Biomed. Informatics, 2017)

Democratizing data science through data science training. - John Darrell Van Horn; Lily Fierro; Jeana Kamdar; Jonathan Gordon 001; Crystal Stewart; Avnish Bhattrai; Sumiko Abe; Xiaoxiao Lei; Caroline O'Driscoll; Aakanchha Sinha; Priyambada Jain; Gully Burns; et al. (PSB, 2018)

The principles of tomorrow's university. - Daniel S. Katz; Gabrielle Allen; Lorena A. Barba; Devin R. Berg; Holly Bik; Carl Boettiger; Christine L. Borgman; C. Titus Brown; Stuart Buck; Randy Burd; Anita de Waard; Martin Paul Eve; et al. (F1000Research, 2018)

Support Vector Machines, Multidimensional Scaling and Magnetic Resonance Imaging Reveal Structural Brain Abnormalities Associated With the Interaction Between Autism Spectrum Disorder and Sex. - Andrei Irimia; Xiaoyu Lei; Carinna M. Torgerson; Zachary J. Jacokes; Sumiko Abe; John D. Van Horn (Frontiers Comput. Neurosci., 2018)

Brain extraction from normal and pathological images: A joint PCA/Image-Reconstruction approach. - Xu Han 009; Roland Kwitt; Stephen R. Aylward; Spyridon Bakas; Bjoern H. Menze; Alexander Asturias; Paul M. Vespa; John D. Van Horn; Marc Niethammer (NeuroImage, 2018)

Advancing the international data science workforce through shared training and education. - John D. Van Horn; Sumiko Abe; José Luis Ambite; Teresa K. Attwood; Niall Beard; Louisa Bellis; Avnish Bhattrai; Alex A. T. Bui; Gully Burns; Lily Fierro; Jonathan Gordon 001; Jeffrey S. Grethe; et al. (F1000Research, 2019)

The LONI QC System: A Semi-Automated, Web-Based and Freely-Available Environment for the Comprehensive Quality Control of Neuroimaging Data. - Hosung Kim; Andrei Irimia; Sam Hobel; Mher Pogosyan; Haoteng Tang; Petros Petrosyan; Rita Esquivel Castelo Blanco; Ben A. Duffy; Lu Zhao; Karen L. Crawford; Sook-Lei Liew; Kristi Clark; et al. (Frontiers Neuroinformatics, 2019)

What Is Old Is New Again: Investigating and Analyzing the Mysteries of the Claustrum. - John Darrell Van Horn (Neuroinformatics, 2019)

Bridging the Brain and Data Sciences. - John Darrell Van Horn (Big Data, 2021)

Mapping the rest of the human connectome: Atlasing the spinal cord and peripheral nervous system. - Andrei Irimia; John Darrell Van Horn (NeuroImage, 2021)

BD2K Training Coordinating Center's ERuDIte: The Educational Resource Discovery Index for Data Science. - José Luis Ambite; Lily Fierro; Jonathan Gordon 001; Gully A. P. C. Burns; Florian Geigl; Kristina Lerman; John D. Van Horn (IEEE Trans. Emerg. Top. Comput., 2021)

Editorial. - John Darrell Van Horn (Neuroinformatics, 2022)

Editorial: What the New White House Rules on Equitable Access Mean for the Neurosciences. - John Darrell Van Horn (Neuroinformatics, 2023)

On the Long-term Archiving of Research Data. - Cyril R. Pernet; Claus Svarer; Ross Blair; John D. Van Horn; Russell A. Poldrack (Neuroinformatics, 2023)

Editorial: Is Now the Time for Foundational Theory of Brain Connectivity? - John Darrell Van Horn; Zachary J. Jacokes; Benjamin Newman; Teague Henry (Neuroinformatics, 2023)

Editorial: On the Economics of Neuroscientific Data Sharing. - John Darrell Van Horn (Neuroinformatics, 2024)

Towards Comprehensive Connectivity Modeling. - Campbell Coleman; John Darrell Van Horn (Neuroinformatics, 2024)

Bridging the Gap: How Neuroinformatics is Preparing the Next Generation of Neuroscience Researchers. - Mathew Birdsall Abrams; John Darrell Van Horn (Neuroinformatics, 2024)

Assessment of Sports Concussion in Female Athletes: A Role for Neuroinformatics? - Rachel M. Edelstein; Sterling Gutterman; Benjamin Newman; John Darrell Van Horn (Neuroinformatics, 2024)

Twenty Years of Neuroinformatics: A Bibliometric Analysis. - Miguel Guillén-Pujadas; David Alaminos; Emili Vizuete Luciano; José M. Merigó; John D. Van Horn (Neuroinformatics, 2025)

International Collaborations at the Intersection of Brain Sciences and Artificial Intelligence. - John Darrell Van Horn; Emiliano Ricciardi (Neuroinformatics, 2025)