Conserved Expression Patterns Predict microRNA Targets. - William Ritchie; Megha Rajasekhar; Stephane Flamant; John E. J. Rasko (PLoS Comput. Biol., 2009)

mimiRNA: a microRNA expression profiler and classification resource designed to identify functional correlations between microRNAs and their targets. - William Ritchie; Stephane Flamant; John E. J. Rasko (Bioinform., 2010)

Defining and providing robust controls for microRNA prediction. - William Ritchie; Dadi Gao; John E. J. Rasko (Bioinform., 2012)

miREval 2.0: a web tool for simple microRNA prediction in genome sequences. - Dadi Gao; Robert Middleton; John E. J. Rasko; William Ritchie (Bioinform., 2013)

Exosomal lncRNAs and cancer: connecting the missing links. - Hojjat Naderi-Meshkin; Xin Lai 002; Raheleh Amirkhah; Julio Vera; John E. J. Rasko; Ulf Schmitz (Bioinform., 2019)

Recent advances in cancer fusion transcript detection. - Ryley Dorney; Bijay P. Dhungel; John E. J. Rasko; Lionel Hebbard; Ulf Schmitz (Briefings Bioinform., 2023)

SpliceWiz: interactive analysis and visualization of alternative splicing in R. - Alex C. H. Wong; Justin J.-L. Wong; John E. J. Rasko; Ulf Schmitz (Briefings Bioinform., 2024)