Symmetry-constrained 3D interpolation for virus X-ray crystallography. - Yibin Zheng; Peter C. Doerschuk; John E. Johnson (ICASSP, 1998)

Low Resolution 3D Reconstructions of Viruses from X-Ray Crystal Diffraction Data. - Yibin Zheng; Tao Li; Peter C. Doerschuk; John E. Johnson (ICIP (3), 1998)

Ab initio reconstruction and experimental design for cryo electron microscopy. - Peter C. Doerschuk; John E. Johnson (IEEE Trans. Inf. Theory, 2000)

Symmetry-constrained 3-D interpolation of viral X-ray crystallography data. - Yibin Zheng; Peter C. Doerschuk; John E. Johnson (IEEE Trans. Signal Process., 2000)

Computational 3D reconstructions by optimization for cryo-electron microscopy. - Zhye Yin; Yili Zheng; Peter C. Doerschuk; John E. Johnson (Computational Imaging, 2003)

Maximum likelihood 3D reconstruction of multiple viruses from mixtures of cryo electron microscope images. - Junghoon Lee; Yili Zheng; Peter C. Doerschuk; Jinghua Tang; John E. Johnson (Computational Imaging, 2005)

Computing the 3-D structure of viruses from electron microscope images. - Junghoon Lee; Peter C. Doerschuk; Jinghua Tang; John E. Johnson (ICASSP (5), 2005)

3-D Reconstructions of Tailed Bacteriophages from CYRO Electron Microscopy Images. - Cory J. Prust; Peter C. Doerschuk; John E. Johnson (ICIP, 2006)

VIPERdb: a relational database for structural virology. - Craig M. Shepherd; Ian A. Borelli; Gabriel Lander; Padmaja Natarajan; Vinay Siddavanahalli; Chandrajit L. Bajaj; John E. Johnson; Charles L. Brooks III; Vijay S. Reddy (Nucleic Acids Res., 2006)

Exact Reduced-Complexity Maximum Likelihood Reconstruction of Multiple 3-D Objects From Unlabeled Unoriented 2-D Projections and Electron Microscopy of Viruses. - Junghoon Lee; Peter C. Doerschuk; John E. Johnson (IEEE Trans. Image Process., 2007)

Photonic integration for high-volume, low-cost applications. - Chris Cole; Bernd Hübner; John E. Johnson (IEEE Commun. Mag., 2009)

VIPERdb2: an enhanced and web API enabled relational database for structural virology. - Mauricio Carrillo-Tripp; Craig M. Shepherd; Ian A. Borelli; Sangita Venkataraman; Gabriel Lander; Padmaja Natarajan; John E. Johnson; Charles L. Brooks III; Vijay S. Reddy (Nucleic Acids Res., 2009)

Multiclass Maximum-Likelihood Symmetry Determination and Motif Reconstruction of 3-D Helical Objects From Projection Images for Electron Microscopy. - Seunghee Lee; Peter C. Doerschuk; John E. Johnson (IEEE Trans. Image Process., 2011)

Highly scalable methods for exploiting a label with unknown location in order to orient a set of single-particle cryo electron microscopy images. - Cory J. Prust; Qiu Wang; Peter C. Doerschuk; John E. Johnson (Computational Imaging, 2012)

Detecting asymmetry in the presence of symmetry with maximum likelihood three-dimensional reconstructions of viruses from electron microscope images. - Kang Wang; Chi-yu Fu; Carlos E. Catalano; Peter E. Prevelige; Peter C. Doerschuk; John E. Johnson (IET Image Process., 2016)

VIPERdb v3.0: a structure-based data analytics platform for viral capsids. - Daniel Montiel-Garcia; Nelly Beatriz Santoyo-Rivera; Phuong Ho; Mauricio Carrillo-Tripp; Charles L. Brooks III; John E. Johnson; Vijay S. Reddy (Nucleic Acids Res., 2021)

Performance and Reliability of Advanced CW Lasers for Silicon Photonics Applications. - John E. Johnson; Kenneth Bacher; Rebecca Schaevitz; Vivek Raghunathan (OFC, 2022)

200G per Lane Uncooled CWDM Hybrid CMBH-Ridge Electroabsorption Modulated Lasers for 2-km Transmission. - Prashanth Bhasker; Sumeeta Arora; Alex Robertson; Tom McCaully; Adrian Ni; John E. Johnson (OFC, 2023)

413 Gbits/s PAM-6 O-band CWDM Electroabsorption Modulated Lasers for 400G per lane IM-DD Applications. - Prashanth Bhasker; Sumeeta Arora; Alex Robertson; Tom McCaully; Adrian Ni; John E. Johnson (OFC, 2025)