Signal analysis for genome-wide maps of histone modifications measured by ChIP-seq. - Dominik Beck; Miriam Brandl; Lies Boelen; Ashwin Unnikrishnan; John E. Pimanda; Jason W. H. Wong (Bioinform., 2012)

BloodChIP: a database of comparative genome-wide transcription factor binding profiles in human blood cells. - Diego Chacón; Dominik Beck; Dilmi Perera; Jason W. H. Wong; John E. Pimanda (Nucleic Acids Res., 2014)

Differential DNA repair underlies mutation hotspots at active promoters in cancer genomes. - Dilmi Perera; Rebecca C. Poulos; Anushi Shah; Dominik Beck; John E. Pimanda; Jason W. H. Wong (Nat., 2016)

Annotating function to differentially expressed LincRNAs in myelodysplastic syndrome using a network-based method. - Keqin Liu; Dominik Beck; Julie A. I. Thoms; Liang Liu; Weiling Zhao; John E. Pimanda; Xiaobo Zhou 001 (Bioinform., 2017)

Analysing high-throughput sequencing data in Python with HTSeq 2.0. - Givanna H. Putri; Simon Anders; Paul Theodor Pyl; John E. Pimanda; Fabio Zanini (Bioinform., 2022)