Unification of miRNA and isomiR research: the mirGFF3 format and the mirtop API. - Thomas Desvignes; Phillipe Loher; Karen Eilbeck; Jeffery Ma; Gianvito Urgese; Bastian Fromm; Jason Sydes; Ernesto Aparicio-Puerta; Víctor Barrera; Roderic Espín; Florian Thibord; Xavier Bofill-De Ros; et al. (Bioinform., 2020)

Differential allelic representation (DAR) identifies candidate eQTLs and improves transcriptome analysis. - Lachlan Baer; Karissa Barthelson; John H. Postlethwait; David L. Adelson; Stephen M. Pederson; Michael Lardelli (PLoS Comput. Biol., 2024)