AceTree: a tool for visual analysis of Caenorhabditis elegans embryogenesis. - Thomas J. Boyle; Zhirong Bao; John I. Murray; Carlos L. Araya; Robert H. Waterston (BMC Bioinform., 2006)

Using machine learning to speed up manual image annotation: application to a 3D imaging protocol for measuring single cell gene expression in the developing C. elegans embryo. - Zafer Aydin; John I. Murray; Robert H. Waterston; William Stafford Noble (BMC Bioinform., 2010)