Application Performance and Flexibility on Exokernel Systems. - M. Frans Kaashoek; Dawson R. Engler; Gregory R. Ganger; Héctor M. Briceño; Russell Hunt; David Mazières; Thomas Pinckney; Robert Grimm 001; John Jannotti; Kenneth Mackenzie (SOSP, 1997)

The Click modular router. - Robert Morris 005; Eddie Kohler; John Jannotti; M. Frans Kaashoek (SOSP, 1999)

A scalable location service for geographic ad hoc routing. - Jinyang Li 001; John Jannotti; Douglas S. J. De Couto; David R. Karger; Robert Morris 005 (MobiCom, 2000)

Overcast: Reliable Multicasting with an Overlay Network. - John Jannotti; David K. Gifford; Kirk L. Johnson; M. Frans Kaashoek; James W. O'Toole Jr. (OSDI, 2000)

CarNet: a scalable ad hoc wireless network system. - Robert Morris 005; John Jannotti; M. Frans Kaashoek; Jinyang Li 001; Douglas Decouto (ACM SIGOPS European Workshop, 2000)

The click modular router. - Eddie Kohler; Robert Morris 005; Benjie Chen; John Jannotti; M. Frans Kaashoek (ACM Trans. Comput. Syst., 2000)

Network layer support for overlay networks. - John Jannotti (2002)

Locality Aware Networked Join Evaluation. - Yanif Ahmad; Ugur Çetintemel; John Jannotti; Alexander Zgolinski (ICDE Workshops, 2005)

Network Awareness in Internet-Scale Stream Processing. - Yanif Ahmad; Ugur Çetintemel; John Jannotti; Alexander Zgolinski; Stanley B. Zdonik (IEEE Data Eng. Bull., 2005)

Data-Centric Visual Sensor Networks for 3D Sensing. - Mert Akdere; Ugur Çetintemel; Daniel E. Crispell; John Jannotti; Jie Mao; Gabriel Taubin (GSN, 2006)

Safe at Any Speed: Fast, Safe Parallelism in Servers. - John Jannotti; Kiran Pamnany (HotDep, 2006)

Application-aware Overlay Networks for Data Dissemination. - Olga Papaemmanouil; Yanif Ahmad; Ugur Çetintemel; John Jannotti (ICDE Workshops, 2006)

Extensible optimization in overlay dissemination trees. - Olga Papaemmanouil; Yanif Ahmad; Ugur Çetintemel; John Jannotti; Yenel Yildirim (SIGMOD Conference, 2006)

XPORT: extensible profile-driven overlay routing trees. - Olga Papaemmanouil; Yanif Ahmad; Ugur Çetintemel; John Jannotti; Yenel Yildirim (SIGMOD Conference, 2006)

Making p2p accountable without losing privacy. - Mira Belenkiy; Melissa Chase; C. Christopher Erway; John Jannotti; Alptekin Küpçü; Anna Lysyanskaya; Eric Rachlin (WPES, 2007)

Event-based constraints for sensornet programming. - Jie Mao; John Jannotti; Mert Akdere; Ugur Çetintemel (DEBS, 2008)

BorderPatrol: isolating events for black-box tracing. - Eric Koskinen; John Jannotti (EuroSys, 2008)

Elyze: enabling safe parallelism in event-driven servers. - Kiran Pamnany; John Jannotti (PASTE, 2008)

Supporting Generic Cost Models for Wide-Area Stream Processing. - Olga Papaemmanouil; Ugur Çetintemel; John Jannotti (ICDE, 2009)

Incentivizing Outsourced Computation. - Mira Belenkiy; Melissa Chase; C. Christopher Erway; John Jannotti; Alptekin Küpçü; Anna Lysyanskaya (IACR Cryptol. ePrint Arch., 2013)