A dorsolateral prefrontal cortex semi-automatic segmenter. - Ramsey Al-Hakim; James Fallon; Delphine Nain; John Melonakos; Allen R. Tannenbaum (Image Processing, 2006)

Finsler Level Set Segmentation for Imagery in Oriented Domains. - Vandana Mohan; John Melonakos; Allen R. Tannenbaum; Marc Niethammer; Marek Kubicki (BMVC, 2007)

Locally-Constrained Region-Based Methods for DW-MRI Segmentation. - John Melonakos; Marc Niethammer; Vandana Mohan; Marek Kubicki; James V. Miller; Allen R. Tannenbaum (ICCV, 2007)

A Probabilistic Model for Haustral Curvatures with Applications to Colon CAD. - John Melonakos; Paulo R. S. Mendonça; Rahul Bhotika; Saad A. Sirohey (MICCAI (2), 2007)

Finsler Tractography for White Matter Connectivity Analysis of the Cingulum Bundle. - John Melonakos; Vandana Mohan; Marc Niethammer; Kate Smith 002; Marek Kubicki; Allen R. Tannenbaum (MICCAI (1), 2007)

Tissue tracking: applications for brain MRI classification. - John Melonakos; Yi Gao 002; Allen R. Tannenbaum (Image Processing, 2007)

Localized statistics for DW-MRI fiber bundle segmentation. - Shawn Lankton; John Melonakos; James G. Malcolm; Samuel Dambreville; Allen R. Tannenbaum (CVPR Workshops, 2008)

Finsler Active Contours. - John Melonakos; Eric Pichon; Sigurd B. Angenent; Allen R. Tannenbaum (IEEE Trans. Pattern Anal. Mach. Intell., 2008)

Geodesic tractography segmentation for directional medical image analysis. - John Melonakos (2008)

3D nonrigid registration via optimal mass transport on the GPU. - Tauseef ur Rehman; Eldad Haber; Gallagher Pryor; John Melonakos; Allen R. Tannenbaum (Medical Image Anal., 2009)

Near-tubular fiber bundle segmentation for diffusion weighted imaging: Segmentation through frame reorientation. - Marc Niethammer; Christopher Zach; John Melonakos; Allen R. Tannenbaum (NeuroImage, 2009)

Fast Hamilton-Jacobi equation solver and neural fiber bundle extraction. - Yi Gao 002; John Melonakos; Allen R. Tannenbaum (Image Processing, 2010)