Prediction, Retrodiction, and The Amount of Information Stored in the Present - Christopher J. Ellison; John R. Mahoney; James P. Crutchfield (CoRR, 2009)

Synchronization and Control in Intrinsic and Designed Computation: An Information-Theoretic Analysis of Competing Models of Stochastic Computation - James P. Crutchfield; Christopher J. Ellison; Ryan G. James; John R. Mahoney (CoRR, 2010)

Many Roads to Synchrony: Natural Time Scales and Their Algorithms - Ryan G. James; John R. Mahoney; Christopher J. Ellison; James P. Crutchfield (CoRR, 2010)

Information Symmetries in Irreversible Processes - Christopher J. Ellison; John R. Mahoney; Ryan G. James; James P. Crutchfield; Joerg Reichardt (CoRR, 2011)

How Hidden are Hidden Processes? A Primer on Crypticity and Entropy Convergence - John R. Mahoney; Christopher J. Ellison; Ryan G. James; James P. Crutchfield (CoRR, 2011)

Moving Frames of Reference, Relativity and Invariance in Transfer Entropy and Information Dynamics. - Joseph T. Lizier; John R. Mahoney (Entropy, 2013)

Occam's Quantum Strop: Synchronizing and Compressing Classical Cryptic Processes via a Quantum Channel. - John R. Mahoney; Cina Aghamohammadi; James P. Crutchfield (CoRR, 2015)

A Closed-Form Shave from Occam's Quantum Razor: Exact Results for Quantum Compression. - Paul M. Riechers; John R. Mahoney; Cina Aghamohammadi; James P. Crutchfield (CoRR, 2015)

The Ambiguity of Simplicity. - Cina Aghamohammadi; John R. Mahoney; James P. Crutchfield (CoRR, 2016)

Extreme Quantum Advantage when Simulating Strongly Coupled Classical Systems. - Cina Aghamohammadi; John R. Mahoney; James P. Crutchfield (CoRR, 2016)

Extreme Quantum Advantage for Rare-Event Sampling. - Cina Aghamohammadi; Samuel P. Loomis; John R. Mahoney; James P. Crutchfield (CoRR, 2017)

Trimming the Independent Fat: Sufficient Statistics, Mutual Information, and Predictability from Effective Channel States. - Ryan G. James; John R. Mahoney; James P. Crutchfield (CoRR, 2017)

Prediction and Generation of Binary Markov Processes: Can a Finite-State Fox Catch a Markov Mouse? - J. Ruebeck; Ryan G. James; John R. Mahoney; James P. Crutchfield (CoRR, 2017)

Classical and Quantum Factors of Channels. - John R. Mahoney; Cina Aghamohammadi; James P. Crutchfield (CoRR, 2017)