Which missing value imputation method to use in expression profiles: a comparative study and two selection schemes. - Guy N. Brock; John R. Shaffer; Richard E. Blakesley; Meredith J. Lotz; George C. Tseng (BMC Bioinform., 2008)

Data-driven trait heritability-based extraction of human facial phenotypes. - Meng Yuan; Seppe Goovaerts; Hanne Hoskens; Stephen Richmond; Susan Walsh; Mark D. Shriver; John R. Shaffer; Mary L. Marazita; Seth M. Weinberg; Hilde Peeters; Peter Claes (BIBM, 2023)

Mapping genes for human face shape: Exploration of univariate phenotyping strategies. - Meng Yuan; Seppe Goovaerts; Michiel Vanneste; Harold S. Matthews; Hanne Hoskens; Stephen Richmond; Ophir D. Klein; Richard A. Spritz; Benedikt Hallgrímsson; Susan Walsh; Mark D. Shriver; John R. Shaffer; et al. (PLoS Comput. Biol., 2024)

Optimized phenotyping of complex morphological traits: enhancing discovery of common and rare genetic variants. - Meng Yuan; Seppe Goovaerts; Myoung K. Lee; Jay Devine; Stephen Richmond; Susan Walsh; Mark D. Shriver; John R. Shaffer; Mary L. Marazita; Hilde Peeters; Seth M. Weinberg; Peter Claes (Briefings Bioinform., 2025)