Combining Affymetrix microarray results. - John R. Stevens; Rebecca W. Doerge (BMC Bioinform., 2005)

metahdep: meta-analysis of hierarchically dependent gene expression studies. - John R. Stevens; Gabriel Nicholas (Bioinform., 2009)

A comparison of probe-level and probeset models for small-sample gene expression data. - John R. Stevens; Jason L. Bell; Kenneth I. Aston; Kenneth L. White (BMC Bioinform., 2010)

A shortcut for multiple testing on the directed acyclic graph of gene ontology. - Garrett Saunders; John R. Stevens; S. Isom (BMC Bioinform., 2014)