restfulSE: A semantically rich interface for cloud-scale genomics with Bioconductor. - Shweta Gopaulakrishnan; Samuela Pollack; BJ Stubbs; Hervé Pagès; John Readey; Sean Davis 001; Levi Waldron; Martin Morgan; Vincent J. Carey (F1000Research, 2019)

Prop3D: A flexible, Python-based platform for machine learning with protein structural properties and biophysical data. - Eli J. Draizen; John Readey; Cameron Mura; Philip E. Bourne (BMC Bioinform., 2024)