Metingear: a development environment for annotating genome-scale metabolic models. - John W. May; A. Gordon James; Christoph Steinbeck (Bioinform., 2013)

Efficient ring perception for the Chemistry Development Kit. - John W. May; Christoph Steinbeck (J. Cheminformatics, 2014)

Reaction Decoder Tool (RDT): extracting features from chemical reactions. - Syed Asad Rahman; Gilliean Torrance; Lorenzo Baldacci; Sergio Martínez Cuesta; Franz Fenninger; Nimish Gopal; Saket Choudhary; John W. May; Gemma L. Holliday; Christoph Steinbeck; Janet M. Thornton (Bioinform., 2016)

libChEBI: an API for accessing the ChEBI database. - Neil Swainston; Janna Hastings; Adriano Dekker; Venkatesh Muthukrishnan; John W. May; Christoph Steinbeck; Pedro Mendes 001 (J. Cheminformatics, 2016)