Mathematical Model for Length Control by the Timing of Substrate Switching in the Type III Secretion System. - Maulik K. Nariya; Johnny Israeli; Jack J. Shi; Eric J. Deeds (PLoS Comput. Biol., 2016)

Improving Small Molecule Generation using Mutual Information Machine. - Danny Reidenbach; Micha Livne; Rajesh K. Ilango; Michelle Gill; Johnny Israeli (CoRR, 2022)

BioNeMo Framework: a modular, high-performance library for AI model development in drug discovery. - Peter St. John; Dejun Lin; Polina Binder; Malcolm Greaves; Vega Shah; John St. John; Adrian Lange; Patrick D. Hsu; Rajesh Illango; Arvind Ramanathan; Anima Anandkumar; David H. Brookes; et al. (CoRR, 2024)