Identifying Treatment Refusal Through Natural Language Processing. - Joel J. Martin; Nathaniel S. Ring; Andrea A. Kelley; Jon Duke (AMIA, 2016)

OMOP on FHIR as an Enabler for Analytics-As-A-Service. - Myung Choi; Richard Starr; Jon Duke (AMIA, 2017)

A Unified Chart Review Tool Integrating OMOP CDM and Unstructured Data. - Charity A. Hilton; Jon Duke (AMIA, 2017)

Generating Multi-label Discrete Patient Records using Generative Adversarial Networks. - Edward Choi 003; Siddharth Biswal; Bradley A. Malin; Jon Duke; Walter F. Stewart; Jimeng Sun 001 (MLHC, 2017)

Generating Multi-label Discrete Electronic Health Records using Generative Adversarial Networks. - Edward Choi 003; Siddharth Biswal; Bradley A. Malin; Jon Duke; Walter F. Stewart; Jimeng Sun 001 (CoRR, 2017)

Explainable Prediction of Medical Codes from Clinical Text. - James Mullenbach; Sarah Wiegreffe; Jon Duke; Jimeng Sun 001; Jacob Eisenstein (NAACL-HLT, 2018)

Integration of FHIR to Facilitate Electronic Case Reporting: Results from a Pilot Study. - Brian E. Dixon; David E. Taylor; Myung Choi; Michael Riley 004; Trey Schneider; Jon Duke (MedInfo, 2019)

EVA: Generating Longitudinal Electronic Health Records Using Conditional Variational Autoencoders. - Siddharth Biswal; Soumya Ghosh; Jon Duke; Bradley A. Malin; Walter F. Stewart; Jimeng Sun 001 (CoRR, 2020)

Public health reporting and outbreak response: synergies with evolving clinical standards for interoperability. - Ninad K. Mishra; Jon Duke; Leslie Lenert; Saugat Karki (J. Am. Medical Informatics Assoc., 2020)

EVA: Generating Longitudinal Electronic Health Records Using Conditional Variational Autoencoders. - Siddharth Biswal; Soumya Ghosh; Jon Duke; Bradley A. Malin; Walter F. Stewart; Cao Xiao; Jimeng Sun 001 (MLHC, 2021)

Advancing Public Health Equity: A Proposed Framework across AI Workflows. - Micaela Siraj; Jacob Zelko; Elizabeth Shivers; Alexandra Trani; Charity A. Hilton; Scott Lee; Travis Hoppe; Juliana Cyril; Jon Duke (AMIA, 2022)

Harmonizing FHIR and Common Data Models Used in Research: Current State and a Path Forward. - Teresa Zayas-Cabán; Belinda Seto; Robert J. Carroll; Jon Duke; Viet Nguyen (AMIA, 2022)

The GenAI Generation: Student Views of Awareness, Preparedness, and Concern. - Micaela Siraj; Jon Duke (CoRR, 2025)