BigBio: A Framework for Data-Centric Biomedical Natural Language Processing. - Jason A. Fries; Leon Weber; Natasha Seelam; Gabriel Altay; Debajyoti Datta; Samuele Garda; Sunny Kang; Rosaline Su; Wojciech Kusa; Samuel Cahyawijaya; Fabio Barth; Simon Ott; et al. (NeurIPS, 2022)

BigBIO: A Framework for Data-Centric Biomedical Natural Language Processing. - Jason Alan Fries; Leon Weber; Natasha Seelam; Gabriel Altay; Debajyoti Datta; Samuele Garda; Myungsun Kang; Ruisi Su; Wojciech Kusa; Samuel Cahyawijaya; Fabio Barth; Simon Ott; et al. (CoRR, 2022)

A Handheld Fiber-Optic Probe to Enable Optical Coherence Tomography of Oral Soft Tissue. - Julia Walther; Jonas Golde; Marius Albrecht; Bryden C. Quirk; Loretta Scolaro; Rodney W. Kirk; Yuliia Gruda; Christian Schnabel; Florian Tetschke; Korinna Joehrens; Dominik Haim; Michaela Buckova; et al. (IEEE Trans. Biomed. Eng., 2022)

Fabricator: An Open Source Toolkit for Generating Labeled Training Data with Teacher LLMs. - Jonas Golde; Patrick Haller 002; Felix Hamborg; Julian Risch; Alan Akbik (EMNLP (Demos), 2023)

PECC: Problem Extraction and Coding Challenges. - Patrick Haller 002; Jonas Golde; Alan Akbik (LREC/COLING, 2024)

Large-Scale Label Interpretation Learning for Few-Shot Named Entity Recognition. - Jonas Golde; Felix Hamborg; Alan Akbik (EACL (1), 2024)

Familiarity: Better Evaluation of Zero-Shot Named Entity Recognition by Quantifying Label Shifts in Synthetic Training Data. - Jonas Golde; Patrick Haller 002; Max Ploner; Fabio Barth; Nicolaas Paul Jedema; Alan Akbik (CoRR, 2024)

BabyHGRN: Exploring RNNs for Sample-Efficient Training of Language Models. - Patrick Haller 002; Jonas Golde; Alan Akbik (CoRR, 2024)

Non-rigid point cloud registration for middle ear diagnostics with endoscopic optical coherence tomography. - Peng Liu 074; Jonas Golde; Joseph Morgenstern; Sebastian Bodenstedt; Chenpan Li; Yujia Hu; Zhaoyu Chen; Edmund Koch; Marcus Neudert; Stefanie Speidel (Int. J. Comput. Assist. Radiol. Surg., 2024)

Familarity: Better Evaluation of Zero-Shot Named Entity Recognition by Quantifying Label Shifts in Synthetic Training Data. - Jonas Golde; Patrick Haller 002; Max Ploner; Fabio Barth; Nicolaas Paul Jedema; Alan Akbik (NAACL (Long Papers), 2025)

MastermindEval: A Simple But Scalable Reasoning Benchmark. - Jonas Golde; Patrick Haller 002; Fabio Barth; Alan Akbik (CoRR, 2025)

Empirical Evaluation of Knowledge Distillation from Transformers to Subquadratic Language Models. - Patrick Haller 002; Jonas Golde; Alan Akbik (CoRR, 2025)

Question Decomposition for Retrieval-Augmented Generation. - Paul J. L. Ammann; Jonas Golde; Alan Akbik (CoRR, 2025)