The Edinburgh Mouse Atlas: Using the CD. - Richard A. Baldock; Jonathan Bard; Roberto Brunelli; Bill Hill; Matthew Kaufman; Kristie Opstad; David Smith; Margaret Stark; Andrew M. Waterhouse; Yiya Yang; Duncan Davidson (Briefings Bioinform., 2001)

Ontologies of Developmental Anatomy: Their Current and Future Roles. - Jonathan Bard; Robin Winter (Briefings Bioinform., 2001)

EMAP and EMAGE - A framework for understanding spatially organized data. - Richard A. Baldock; Jonathan Bard; Albert Burger; Nicholas Burton; Jeffrey H. Christiansen; Guangjie Feng; Bill Hill; Derek Houghton; Matthew Kaufman; Jianguo Rao; James Sharpe; Allyson Ross; et al. (Neuroinformatics, 2003)

Part-of Relations in Anatomy Ontologies: A Proposal for RDFS and OWL Formalisations. - J. Stuart Aitken; Bonnie L. Webber; Jonathan Bard (Pacific Symposium on Biocomputing, 2004)

COBrA: a bio-ontology editor. - J. Stuart Aitken; Roman Korf; Bonnie L. Webber; Jonathan Bard (Bioinform., 2005)

Human-CMouse Gene Searcher: a tool to assist discovery of malformation-associated genes by using phenotype databases. - Ian Bradford; Robin Winter; Carl Evans; Jonathan Bard (Bioinform., 2005)

Editorial. - Jonathan Bard; Cynthia Barnhart (J. Sched., 2006)

OBO Explorer: an editor for open biomedical ontologies in OWL. - J. Stuart Aitken; Yin Chen; Jonathan Bard (Bioinform., 2008)

Morphogenesis. - Jonathan Bard (Scholarpedia, 2008)

Anatomical Ontologies for Model Organisms: The Fungi and Animals. - Jonathan Bard (Anatomy Ontologies for Bioinformatics, 2008)

XSPAN - A Cross-Species Anatomy Network. - Albert Burger; Jonathan Bard (Anatomy Ontologies for Bioinformatics, 2008)