A reference database for circular dichroism spectroscopy covering fold and secondary structure space. - Jonathan G. Lees; Andrew J. Miles; Frank Wien; B. A. Wallace (Bioinform., 2006)

Novel methods for secondary structure determination using low wavelength (VUV) circular dichroism spectroscopic data. - Jonathan G. Lees; Andrew J. Miles; Robert W. Janes; B. A. Wallace (BMC Bioinform., 2006)

Combining sequence-based prediction methods and circular dichroism and infrared spectroscopic data to improve protein secondary structure determinations. - Jonathan G. Lees; Robert W. Janes (BMC Bioinform., 2008)

Gene3D: comprehensive structural and functional annotation of genomes. - Corin Yeats; Jonathan G. Lees; Adam James Reid; Paul Kellam; Nigel J. Martin 001; Xinhui Liu; Christine A. Orengo (Nucleic Acids Res., 2008)

Gene3D: merging structure and function for a Thousand genomes. - Jonathan G. Lees; Corin Yeats; Oliver Redfern; Andrew B. Clegg; Christine A. Orengo (Nucleic Acids Res., 2010)

Finding the "Dark Matter" in Human and Yeast Protein Network Prediction and Modelling. - Juan A. G. Ranea; Ian Morilla; Jonathan G. Lees; Adam James Reid; Corin Yeats; Andrew B. Clegg; Francisca Sánchez-Jiménez; Christine A. Orengo (PLoS Comput. Biol., 2010)

The Gene3D Web Services: a platform for identifying, annotating and comparing structural domains in protein sequences. - Corin Yeats; Jonathan G. Lees; Phil Carter; Ian Sillitoe; Christine A. Orengo (Nucleic Acids Res., 2011)

Gene3D: a domain-based resource for comparative genomics, functional annotation and protein network analysis. - Jonathan G. Lees; Corin Yeats; James Richard Perkins; Ian Sillitoe; Robert Rentzsch; Benoit H. Dessailly; Christine A. Orengo (Nucleic Acids Res., 2012)

New functional families (FunFams) in CATH to improve the mapping of conserved functional sites to 3D structures. - Ian Sillitoe; Alison L. Cuff; Benoit H. Dessailly; Natalie L. Dawson; Nicholas Furnham; David A. Lee; Jonathan G. Lees; Tony E. Lewis; Romain A. Studer; Robert Rentzsch; Corin Yeats; Janet M. Thornton; et al. (Nucleic Acids Res., 2013)

Gene3D: Multi-domain annotations for protein sequence and comparative genome analysis. - Jonathan G. Lees; David A. Lee; Romain A. Studer; Natalie L. Dawson; Ian Sillitoe; Sayoni Das; Corin Yeats; Benoit H. Dessailly; Robert Rentzsch; Christine A. Orengo (Nucleic Acids Res., 2014)

Functional classification of CATH superfamilies: a domain-based approach for protein function annotation. - Sayoni Das; David A. Lee; Ian Sillitoe; Natalie L. Dawson; Jonathan G. Lees; Christine A. Orengo (Bioinform., 2015)

FUN-L: gene prioritization for RNAi screens. - Jonathan G. Lees; Jean-Karim Hériché; Ian Morilla; José María Fernández 001; Priit Adler; Martin Krallinger; Jaak Vilo; Alfonso Valencia; Jan Ellenberg; Juan A. G. Ranea; Christine A. Orengo (Bioinform., 2015)

CATH FunFHMMer web server: protein functional annotations using functional family assignments. - Sayoni Das; Ian Sillitoe; David A. Lee; Jonathan G. Lees; Natalie L. Dawson; John Ward; Christine A. Orengo (Nucleic Acids Res., 2015)

CATH: comprehensive structural and functional annotations for genome sequences. - Ian Sillitoe; Tony E. Lewis; Alison L. Cuff; Sayoni Das; Paul Ashford; Natalie L. Dawson; Nicholas Furnham; Roman A. Laskowski; David A. Lee; Jonathan G. Lees; Sonja Lehtinen; Romain A. Studer; et al. (Nucleic Acids Res., 2015)

Gene3D: expanding the utility of domain assignments. - Su Datt Lam; Natalie L. Dawson; Sayoni Das; Ian Sillitoe; Paul Ashford; David A. Lee; Sonja Lehtinen; Christine A. Orengo; Jonathan G. Lees (Nucleic Acids Res., 2016)

CATH: an expanded resource to predict protein function through structure and sequence. - Natalie L. Dawson; Tony E. Lewis; Sayoni Das; Jonathan G. Lees; David A. Lee; Paul Ashford; Christine A. Orengo; Ian Sillitoe (Nucleic Acids Res., 2017)

Analysis of temporal transcription expression profiles reveal links between protein function and developmental stages of Drosophila melanogaster. - Cen Wan; Jonathan G. Lees; Federico Minneci; Christine A. Orengo; David T. Jones (PLoS Comput. Biol., 2017)

Gene3D: Extensive prediction of globular domains in proteins. - Tony E. Lewis; Ian Sillitoe; Natalie L. Dawson; Su Datt Lam; Tristan Clarke; David A. Lee; Christine A. Orengo; Jonathan G. Lees (Nucleic Acids Res., 2018)

cath-resolve-hits: a new tool that resolves domain matches suspiciously quickly. - Tony E. Lewis; Ian Sillitoe; Jonathan G. Lees (Bioinform., 2019)

CATH: expanding the horizons of structure-based functional annotations for genome sequences. - Ian Sillitoe; Natalie L. Dawson; Tony E. Lewis; Sayoni Das; Jonathan G. Lees; Paul Ashford; Adeyelu Tolulope; Harry M. Scholes; Ilya Senatorov; Andra Bujan; Fatima Ceballos Rodriguez-Conde; Benjamin Dowling; et al. (Nucleic Acids Res., 2019)

Protein Structure Classification. - Natalie L. Dawson; Sayoni Das; Jonathan G. Lees; Christine A. Orengo (Encyclopedia of Bioinformatics and Computational Biology (2), 2019)

CATH: increased structural coverage of functional space. - Ian Sillitoe; Nicola Bordin; Natalie L. Dawson; Vaishali P. Waman; Paul Ashford; Harry M. Scholes; Camilla S. M. Pang; Laurel Woodridge; Clemens Rauer; Neeladri Sen; Mahnaz Abbasian; Sean Le Cornu; et al. (Nucleic Acids Res., 2021)

Biological impact of mutually exclusive exon switching. - Su Datt Lam; M. Madan Babu; Jonathan G. Lees; Christine A. Orengo (PLoS Comput. Biol., 2021)