Deep learning identifies synergistic drug combinations for treating COVID-19. - Wengong Jin; Jonathan M. Stokes; Richard T. Eastman; Zina Itkin; Alexey V. Zakharov; James J. Collins; Tommi S. Jaakkola; Regina Barzilay (Proc. Natl. Acad. Sci. USA, 2021)

Generative AI for designing and validating easily synthesizable and structurally novel antibiotics. - Kyle Swanson; Gary Liu; Denise B. Catacutan; Autumn Arnold; James Zou 001; Jonathan M. Stokes (Nat. Mac. Intell., 2024)

Discovery of a structural class of antibiotics with explainable deep learning. - Felix Wong; Erica J. Zheng; Jacqueline A. Valeri; Nina M. Donghia; Melis N. Anahtar; Satotaka Omori; Alicia Li; Andres Cubillos-Ruiz; Aarti Krishnan; Wengong Jin; Abigail L. Manson; Jens Friedrichs; et al. (Nat., 2024)