On Bias in the Estimation of Autocorrelations for fMRI Voxel Time-Series Analysis. - Jonathan Marchini; Stephen M. Smith 001 (NeuroImage, 2003)

Comparing methods of analyzing fMRI statistical parametric maps. - Jonathan Marchini; Anne Presanis (NeuroImage, 2004)

Independent Component Analysis of Functional Magnetic Resonance Imaging Data Using Wavelet Dictionaries. - Robert Johnson; Jonathan Marchini; Stephen M. Smith 001; Christian F. Beckmann (ICA, 2007)

HAPGEN2: simulation of multiple disease SNPs. - Zhan Su; Jonathan Marchini; Peter Donnelly (Bioinform., 2011)

Genotype calling and phasing using next-generation sequencing reads and a haplotype scaffold. - Androniki Menelaou; Jonathan Marchini (Bioinform., 2013)

Phasing for medical sequencing using rare variants and large haplotype reference panels. - Kevin Sharp; Warren Kretzschmar; Olivier Delaneau; Jonathan Marchini (Bioinform., 2016)

A non-linear regression method for estimation of gene-environment heritability. - Matthew Kerin; Jonathan Marchini (Bioinform., 2021)