XPRESSyourself: Enhancing, standardizing, and automating ribosome profiling computational analyses yields improved insight into data. - Jordan A. Berg; Jonathan R. Belyeu; Jeffrey T. Morgan; Yeyun Ouyang; Alex J. Bott; Aaron R. Quinlan; Jason Gertz; Jared Rutter (PLoS Comput. Biol., 2020)

Unfazed: parent-of-origin detection for large and small de novo variants. - Jonathan R. Belyeu; Thomas A. Sasani; Brent S. Pedersen; Aaron R. Quinlan (Bioinform., 2021)