Graph Neural Networks Including Sparse Interpretability. - Chris Lin; Gerald J. Sun; Krishna C. Bulusu; Jonathan R. Dry; Marylens Hernandez (CoRR, 2020)

Identification of Intrinsic Drug Resistance and Its Biomarkers in High-Throughput Pharmacogenomic and CRISPR Screens. - Iñigo Ayestaran; Ana Galhoz; Elmar Spiegel; Ben Sidders; Jonathan R. Dry; Frank Dondelinger; Andreas Bender 002; Ultan McDermott; Francesco Iorio; Michael P. Menden (Patterns, 2020)

DeePaN: deep patient graph convolutional network integrating clinico-genomic evidence to stratify lung cancers for immunotherapy. - Chao Fang; Dong Xu 002; Jing Su; Jonathan R. Dry; Bolan Linghu (npj Digit. Medicine, 2021)

Privacy preserving validation for multiomic prediction models. - Talal Ahmed; Mark A. Carty; Stephane Wenric; Jonathan R. Dry; Ameen A. Salahudeen; Aly A. Khan; Eric Lefkofsky; Martin C. Stumpe; Raphael Pelossof (Briefings Bioinform., 2022)