The Gene Set Builder: collation, curation, and distribution of sets of genes. - Dimas Yusuf; Jonathan S. Lim; Wyeth W. Wasserman (BMC Bioinform., 2005)

The PAZAR database of gene regulatory information coupled to the ORCA toolkit for the study of regulatory sequences. - Elodie Portales-Casamar; David J. Arenillas; Jonathan S. Lim; Magdalena I. Swanson; Steven Jiang; Anthony McCallum; Stefan Kirov; Wyeth W. Wasserman (Nucleic Acids Res., 2009)

JASPAR 2014: an extensively expanded and updated open-access database of transcription factor binding profiles. - Anthony Mathelier; Xiaobei Zhao; Allen W. Zhang; François Parcy; Rebecca Worsley-Hunt; David J. Arenillas; Sorana Buchman; Chih-Yu Chen; Alice Yi Chou; Hans Ienasescu; Jonathan S. Lim; Casper Shyr; et al. (Nucleic Acids Res., 2014)

UAV-Based Remote Sensing for Managing Alaskan Native Heritage Landscapes in the Yukon-Kuskokwim Delta. - Jonathan S. Lim; Sean Gleason; Meta Williams; Gonzalo J. Linares Matás; Daniel Marsden; Warren Jones (Remote. Sens., 2022)

Nalaquq ("it is found"): a knowledge co-production framework for environmental sensing and communication in Indigenous arctic communities. - Sean Gleason; Jonathan S. Lim; Lynn Marie Church; Warren Jones; Carl Nicolai; Joe Pleasant; Willard Church; Alice Watterson; Lonny Alaskuk Strunk; Richard Knecht; Charlotta Hillerdal (J. Comput. Mediat. Commun., 2023)