Bayesian inference of metabolic kinetics from genome-scale multiomics data. - Peter C. St. John; Jonathan Strutz; Linda J. Broadbelt; Keith E. J. Tyo; Yannick J. Bomble (PLoS Comput. Biol., 2019)

MINE 2.0: enhanced biochemical coverage for peak identification in untargeted metabolomics. - Jonathan Strutz; Kevin M. Shebek; Linda J. Broadbelt; Keith E. J. Tyo (Bioinform., 2022)

Pickaxe: a Python library for the prediction of novel metabolic reactions. - Kevin M. Shebek; Jonathan Strutz; Linda J. Broadbelt; Keith E. J. Tyo (BMC Bioinform., 2023)