Population Heterogeneity in the Epithelial to Mesenchymal Transition Is Controlled by NFAT and Phosphorylated Sp1. - Russell Gould; David M. Bassen; Anirikh Chakrabarti; Jeffrey D. Varner; Jonathan T. Butcher (PLoS Comput. Biol., 2016)

JuPOETs: a constrained multiobjective optimization approach to estimate biochemical model ensembles in the Julia programming language. - David M. Bassen; Michael Vilkhovoy; Mason Minot; Jonathan T. Butcher; Jeffrey D. Varner (BMC Syst. Biol., 2017)

Engineering Studio Pedagogy - First Experience in Integrating Novel Studio Sessions in Biomedical Engineering Courses. - Viswajith S. Vasudevan; Stephanie M. Fuchs; Jonathan T. Butcher (FIE, 2024)