Augmenting an artificial immune network. - Mark Neal; John Hunt; Jon Timmis (SMC, 1998)

Artificial immune systems : a novel data analysis technique inspired by the immune network theory. - Jonathan Timmis (2000)

AINE: An Immunological Approach to Data Mining. - Thomas Knight; Jon Timmis (ICDM, 2001)

A resource limited artificial immune system for data analysis. - Jon Timmis; Mark James Neal (Knowl. Based Syst., 2001)

Artificial immune systems - a new computational intelligence paradigm. - Leandro Nunes de Castro; Jonathan Timmis (Springer, 2002)

An artificial immune network for multimodal function optimization. - Leandro Nunes de Castro; Jon Timmis (IEEE Congress on Evolutionary Computation, 2002)

Chasing chaos. - Johnny Kelsey; Jonathan Timmis; Andrew Hone (IEEE Congress on Evolutionary Computation, 2003)

AISEC: an artificial immune system for e-mail classification. - Andrew Secker; Alex Alves Freitas; Jon Timmis (IEEE Congress on Evolutionary Computation, 2003)

Immune Inspired Somatic Contiguous Hypermutation for Function Optimisation. - Johnny Kelsey; Jon Timmis (GECCO, 2003)

Revisiting the Foundations of Artificial Immune Systems: A Problem-Oriented Perspective. - Alex Alves Freitas; Jon Timmis (ICARIS, 2003)

Software Vaccination: An Artificial Immune System Approach to Mutation Testing. - Peter May; Keith Mander; Jon Timmis (ICARIS, 2003)

A Danger Theory Inspired Approach to Web Mining. - Andrew Secker; Alex Alves Freitas; Jon Timmis (ICARIS, 2003)

Biologically motivated computational models. - Mitra Basu; Jon Timmis; Dipankar Dasgupta; Daniel D. Lee; Guang R. Gao; Kwabena A. Boahen (IJCNN, 2003)

Guest Editorial Special Issue on Artificial Immune Systems. - Peter J. Bentley; Jon Timmis (Genet. Program. Evolvable Mach., 2003)

Timidity: A Useful Emotional Mechanism for Robot Control?. - Mark James Neal; Jon Timmis (Informatica (Slovenia), 2003)

Artificial immune systems as a novel soft computing paradigm. - Leandro Nunes de Castro; Jon Timmis (Soft Comput., 2003)

Assessing the performance of two immune inspired algorithms and a hybrid genetic algorithm for function optimisation. - Jonathan Timmis; Camilla Edmonds; Johnny Kelsey (IEEE Congress on Evolutionary Computation, 2004)

A Comment on Opt-AiNET: An Immune Network Algorithm for Optimisation. - Jon Timmis; Camilla Edmonds (GECCO (1), 2004)

A Fractal Immune Network. - Peter J. Bentley; Jon Timmis (ICARIS, 2004)

Exploiting Immunological Properties for Ubiquitous Computing Systems. - Philipp H. Mohr; Nick Ryan; Jon Timmis (ICARIS, 2004)

Towards a Conceptual Framework for Artificial Immune Systems. - Susan Stepney; Robert E. Smith 001; Jonathan Timmis; Andrew M. Tyrrell (ICARIS, 2004)

Exploiting Parallelism Inherent in AIRS, an Artificial Immune Classifier. - Andrew B. Watkins 001; Jon Timmis (ICARIS, 2004)

Exploiting the Immune System for Computation (Profile). - Jonathan Timmis (IEEE Intell. Informatics Bull., 2004)

Artificial Immune Recognition System (AIRS): An Immune-Inspired Supervised Learning Algorithm. - Andrew B. Watkins 001; Jon Timmis; Lois C. Boggess (Genet. Program. Evolvable Mach., 2004)

On the appropriateness of negative selection defined over Hamming shape-space as a network intrusion detection system. - Thomas Stibor; Jonathan Timmis; Claudia Eckert 001 (Congress on Evolutionary Computation, 2005)

Artificial Homeostatic System: A Novel Approach. - Patrícia Amâncio Vargas; Renan Cipriano Moioli; Leandro Nunes de Castro; Jon Timmis; Mark James Neal; Fernando J. Von Zuben (ECAL, 2005)

Is negative selection appropriate for anomaly detection? - Thomas Stibor; Philipp H. Mohr; Jonathan Timmis; Claudia Eckert 001 (GECCO, 2005)

Inspiration for the Next Generation of Artificial Immune Systems. - Paul S. Andrews; Jon Timmis (ICARIS, 2005)

Immunising Automated Teller Machines. - Modupe Ayara; Jon Timmis; Rogério de Lemos; Simon Forrest (ICARIS, 2005)

A Markov Chain Model of the B-Cell Algorithm. - Edward Clark; Andrew Hone; Jon Timmis (ICARIS, 2005)

Biomolecular Immune-Computer: Theoretical Basis and Experimental Simulator. - Larisa B. Goncharova; Yannick Jacques; Carlos Martín-Vide; Alexander O. Tarakanov; Jonathan Timmis (ICARIS, 2005)

A Comparative Study of Real-Valued Negative Selection to Statistical Anomaly Detection Techniques. - Thomas Stibor; Jonathan Timmis; Claudia Eckert 001 (ICARIS, 2005)

On Diversity and Artificial Immune Systems: Incorporating a Diversity Operator into aiNet. - Paul S. Andrews; Jon Timmis (WIRN/NAIS, 2005)

Challenges for Artificial Immune Systems. - Jon Timmis (WIRN/NAIS, 2005)

Conceptual Frameworks for Artificial Immune Systems. - Susan Stepney; Robert Elliott Smith; Jonathan Timmis; Andy M. Tyrrell; Mark James Neal; Andrew N. W. Hone (Int. J. Unconv. Comput., 2005)

Introduction. - Jon Timmis; Susan Stepney; Peter J. Bentley; Giuseppe Nicosia; Vincenzo Cutello (Int. J. Unconv. Comput., 2005)

Journeys in non-classical computation I: A grand challenge for computing research. - Susan Stepney; Samuel L. Braunstein; John A. Clark; Andrew M. Tyrrell; Andrew Adamatzky; Robert E. Smith 001; Tom Addis; Colin G. Johnson; Jonathan Timmis; Peter H. Welch; Robin Milner; Derek Partridge (Parallel Algorithms Appl., 2005)

The Link between r-contiguous Detectors and k-CNF Satisfiability. - Thomas Stibor; Jonathan Timmis; Claudia Eckert 001 (IEEE Congress on Evolutionary Computation, 2006)

On the Investigation of Artificial Immune Systems on Imbalanced Data Classification for Power Distribution System Fault Cause Identification. - Le Xu; Mo-Yuen Chow; Jon Timmis; Leroy S. Taylor; Andrew B. Watkins 001 (IEEE Congress on Evolutionary Computation, 2006)

A Computational Model of Degeneracy in a Lymph Node. - Paul S. Andrews; Jon Timmis (ICARIS, 2006)

On Permutation Masks in Hamming Negative Selection. - Thomas Stibor; Jonathan Timmis; Claudia Eckert 001 (ICARIS, 2006)

On the Use of Hyperspheres in Artificial Immune Systems as Antibody Recognition Regions. - Thomas Stibor; Jonathan Timmis; Claudia Eckert 001 (ICARIS, 2006)

Generalization Regions in Hamming Negative Selection. - Thomas Stibor; Jonathan Timmis; Claudia Eckert 001 (Intelligent Information Systems, 2006)

"Going Back to our Roots": Second Generation Biocomputing. - Jon Timmis; Martyn Amos; Wolfgang Banzhaf; Andy M. Tyrrell (Int. J. Unconv. Comput., 2006)

Artificial Immune Systems for IT-Security (Künstliche Immunsysteme für IT-Sicherheit). - Thomas Stibor; Claudia Eckert 001; Jonathan Timmis (it Inf. Technol., 2006)

Journeys in non-classical computation II: initial journeys and waypoints. - Susan Stepney; Samuel L. Braunstein; John A. Clark; Andrew M. Tyrrell; Andrew Adamatzky; Robert E. Smith 001; Thomas R. Addis; Colin G. Johnson; Jonathan Timmis; Peter H. Welch; Robin Milner; Derek Partridge (Int. J. Parallel Emergent Distributed Syst., 2006)

Comparison of a multi-layered artificial immune system with a kohonen network. - Thomas Knight; Jonathan Timmis (IEEE Congress on Evolutionary Computation, 2007)

Comments on real-valued negative selection vs. real-valued positive selection and one-class SVM. - Thomas Stibor; Jonathan Timmis (IEEE Congress on Evolutionary Computation, 2007)

The Immune System in Pieces: Computational Lessons from Degeneracy in the Immune System. - Miguel Mendao; Jonathan Timmis; Paul S. Andrews; Matthew N. Davies (FOCI, 2007)

An Investigation on the Compression Quality of aiNet. - Thomas Stibor; Jonathan Timmis (FOCI, 2007)

Immune and Evolutionary Approaches to Software Mutation Testing. - Peter May; Jon Timmis; Keith Mander (ICARIS, 2007)

On Immune Inspired Homeostasis for Electronic Systems. - Nick D. L. Owens; Jonathan Timmis; Andrew J. Greensted; Andy M. Tyrrell (ICARIS, 2007)

Evolvable Hardware, a Fundamental Technology for Homeostasis. - Andy M. Tyrrell; Jon Timmis; Andrew J. Greensted; Nick D. L. Owens (WEAH, 2007)

On the hierarchical classification of G protein-coupled receptors. - Matthew N. Davies; Andrew Secker; Alex Alves Freitas; Miguel Mendao; Jonathan Timmis; Darren R. Flower (Bioinform., 2007)

Artificial immune systems - today and tomorrow. - Jon Timmis (Nat. Comput., 2007)

An Immune Algorithm for Protein Structure Prediction on Lattice Models. - Vincenzo Cutello; Giuseppe Nicosia; Mario Pavone; Jonathan Timmis (IEEE Trans. Evol. Comput., 2007)

Revisiting the Foundations of Artificial Immune Systems for Data Mining. - Alex Alves Freitas; Jonathan Timmis (IEEE Trans. Evol. Comput., 2007)

Immune-Inspired Adaptable Error Detection for Automated Teller Machines. - Rogério de Lemos; Jonathan Timmis; Modupe Ayara; Simon Forrest (IEEE Trans. Syst. Man Cybern. Part C, 2007)

Investigating Patterns for the Process-Oriented Modelling and Simulation of Space in Complex Systems. - Paul S. Andrews; Adam T. Sampson; John Markus Bjørndalen; Susan Stepney; Jon Timmis; Douglas N. Warren; Peter H. Welch (ALIFE, 2008)

Complex Systems Models - Engineering Simulations. - Fiona A. C. Polack; Tim Hoverd; Adam T. Sampson; Susan Stepney; Jon Timmis (ALIFE, 2008)

Grand Challenge 7: Journeys in Non-Classical Computation. - Susan Stepney; Samson Abramsky; Andy Adamatzky; Colin G. Johnson; Jon Timmis (BCS Int. Acad. Conf., 2008)

Artificial iImmune systems for data fusion: A novel biologically inspired approach. - Adam Knowles; Jon Timmis; Rogério de Lemos; Simon Forrest; Heather McCracken (FUSION, 2008)

The Pathways of Complement. - Jonathan M. Aitken; Tim Clarke; Jonathan Timmis (ICARIS, 2008)

Adaptable Lymphocytes for Artificial Immune Systems. - Paul S. Andrews; Jon Timmis (ICARIS, 2008)

A Neuro-Immune Inspired Robust Real Time Visual Tracking System. - Yang Liu 029; Jon Timmis; Tim Clarke (ICARIS, 2008)

Modelling the Tunability of Early T Cell Signalling Events. - Nick D. L. Owens; Jon Timmis; Andrew J. Greensted; Andy M. Tyrrell (ICARIS, 2008)

Empirical Investigation of an Artificial Cytokine Network. - Mark Read 001; Jon Timmis; Paul S. Andrews (ICARIS, 2008)

An Artificial Immune System for Evolving Amino Acid Clusters Tailored to Protein Function Prediction. - Andrew Secker; Matthew N. Davies; Alex Alves Freitas; Jonathan Timmis; Edward Clark; Darren R. Flower (ICARIS, 2008)

Hardware Acceleration of an Immune Network Inspired Evolutionary Algorithm for Medical Diagnosis. - Stephen L. Smith 002; Andrew J. Greensted; Jon Timmis (ICES, 2008)

Immuno-engineering. - Jon Timmis; Emma Hart; Andy Hone; Mark James Neal; Adrian Robins; Susan Stepney; Andy M. Tyrrell (BICC, 2008)

A New Paradigm for SpeckNets: Inspiration from Fungal Colonies. - Ruth Falconer; James Bown; Emma Hart; Jon Timmis (SASO Workshops, 2008)

An Artificial Lymph Node Architecture for Homeostasis in Collective Robotic Systems. - Maizura Mokhtar; Jon Timmis; Andy M. Tyrrell; Ran Bi (SASO Workshops, 2008)

Immune Systems and Computation: An Interdisciplinary Adventure. - Jon Timmis; Paul S. Andrews; Nick D. L. Owens; Edward Clark (UC, 2008)

Application areas of AIS: The past, the present and the future. - Emma Hart; Jon Timmis (Appl. Soft Comput., 2008)

AISIID: An artificial immune system for interesting information discovery on the web. - Andrew Secker; Alex Alves Freitas; Jon Timmis (Appl. Soft Comput., 2008)

Optimizing amino acid groupings for GPCR classification. - Matthew N. Davies; Andrew Secker; Alex Alves Freitas; Edward Clark; Jonathan Timmis; Darren R. Flower (Bioinform., 2008)

An immune network inspired evolutionary algorithm for the diagnosis of Parkinson's disease. - Stephen L. Smith 002; Jon Timmis (Biosyst., 2008)

An interdisciplinary perspective on artificial immune systems. - Jonathan Timmis; Paul S. Andrews; Nick D. L. Owens; Edward Clark (Evol. Intell., 2008)

Theoretical advances in artificial immune systems. - Jonathan Timmis; Andrew Hone; Thomas Stibor; Edward Clark (Theor. Comput. Sci., 2008)

Nominal-Yield-Area Tradeoff in Automatic Synthesis of Analog Circuits: A Genetic Programming Approach Using Immune-Inspired Operators. - Piero Conca; Giuseppe Nicosia; Giovanni Stracquadanio; Jon Timmis (AHS, 2009)

Modelling and simulation of granuloma formation in visceral leishmaniasis. - Anton J. Flugge; Jon Timmis; Paul S. Andrews; John Moore; Paul M. Kaye (IEEE Congress on Evolutionary Computation, 2009)

Anomaly detection inspired by immune network theory: A proposal. - HuiKeng Lau; Jon Timmis; Iain Bate (IEEE Congress on Evolutionary Computation, 2009)

A modified Dendritic Cell Algorithm for on-line error detection in robotic systems. - Maizura Mokhtar; Ran Bi; Jon Timmis; Andy M. Tyrrell (IEEE Congress on Evolutionary Computation, 2009)

An Immuno-engineering Approach for Anomaly Detection in Swarm Robotics. - HuiKeng Lau; Iain Bate; Jon Timmis (ICARIS, 2009)

T Cell Receptor Signalling Inspired Kernel Density Estimation and Anomaly Detection. - Nick D. L. Owens; Andrew J. Greensted; Jon Timmis; Andrew M. Tyrrell (ICARIS, 2009)

Using UML to Model EAE and Its Regulatory Network. - Mark Read 001; Jon Timmis; Paul S. Andrews; Vipin Kumar (ICARIS, 2009)

An adaptive neuro-endocrine system for robotic systems. - Jonathan Timmis; Mark James Neal; James Thorniley (RiiSS, 2009)

Profile Adaptation in Adaptive Information Filtering: An Immune Inspired Approach. - Nurulhuda Firdaus Mohd Azmi; Jon Timmis; Fiona Polack (SoCPaR, 2009)

An Artificial Immune System for Clustering Amino Acids in the Context of Protein Function Classification. - Andrew Secker; Matthew N. Davies; Alex Alves Freitas; Jonathan Timmis; Edward Clark; Darren R. Flower (J. Math. Model. Algorithms, 2009)

Immunecomputing. - Jon Timmis (Encyclopedia of Complexity and Systems Science, 2009)

Exploiting Loose Horizontal Coupling in Evolutionary Swarm Robotics. - Jennifer Owen; Susan Stepney; Jonathan Timmis; Alan F. T. Winfield (ANTS Conference, 2010)

The Diagnostic Dendritic Cell Algorithm for robotic systems. - Ran Bi; Jon Timmis; Andy M. Tyrrell (IEEE Congress on Evolutionary Computation, 2010)

Principles of protein processing for a self-organising associative memory. - Omer Qadir; Yang Jerry Liu; Jon Timmis; Gianluca Tempesti; Andy M. Tyrrell (IEEE Congress on Evolutionary Computation, 2010)

A Petri Net Model of Granulomatous Inflammation. - Luca Albergante; Jon Timmis; Paul S. Andrews; Lynette Beattie; Paul M. Kaye (ICARIS, 2010)

A Developmental and Immune-Inspired Dynamic Task Allocation Algorithm for Microprocessor Array Systems. - Yang Liu 029; Jon Timmis; Omer Qadir; Gianluca Tempesti; Andy M. Tyrrell (ICARIS, 2010)

On Homeostasis in Collective Robotic Systems. - Jon Timmis; Andy M. Tyrrell (ICARIS, 2010)

Towards a Principled Design of Bio-inspired Solutions to Adaptive Information Filtering. - Nurulhuda Firdaus Mohd Azmi; Jon Timmis; Fiona Polack (ICECCS, 2010)

Towards Self-Healing Swarm Robotic Systems Inspired by Granuloma Formation. - Amelia Ritahani Ismail; Jon Timmis (ICECCS, 2010)

Reflections on the Simulation of Complex Systems for Science. - Fiona A. C. Polack; Paul S. Andrews; Teodor Ghetiu; Mark Read 001; Susan Stepney; Jon Timmis; Adam T. Sampson (ICECCS, 2010)

Preface. - Peter A. Lindsay; Franz J. Rammig; Mike Hinchey; Jon Timmis (DIPES/BICC, 2010)

A Neural-Endocrine Architecture for Foraging in Swarm Robotic Systems. - Jon Timmis; Lachlan Murray; Mark James Neal (NICSO, 2010)

Hierarchical classification of G-Protein-Coupled Receptors with data-driven selection of attributes and classifiers. - Andrew Secker; Matthew N. Davies; Alex Alves Freitas; Edward Clark; Jonathan Timmis; Darren R. Flower (Int. J. Data Min. Bioinform., 2010)

An experimental comparison of a genetic algorithm and a hill-climber for term selection. - Andrew MacFarlane 001; Andrew Secker; Peter May; Jonathan Timmis (J. Documentation, 2010)

Artificial Immune Systems: structure, function, diversity and an application to biclustering. - Leandro Nunes de Castro; Jon Timmis; Helder Knidel; Fernando J. Von Zuben (Nat. Comput., 2010)

Theory and applications of artificial immune systems. - Xiao Zhi Gao 001; Mo-Yuen Chow; David Pelta; Jon Timmis (Neural Comput. Appl., 2010)

Special Issue on Artificial Immune Systems: Theory and Applications. - Xiao Zhi Gao 001; Mo-Yuen Chow; David Pelta; Jon Timmis (Neural Comput. Appl., 2010)

Special issue on artificial immune systems. - Jon Timmis; Paul S. Andrews; Emma Hart (Swarm Intell., 2010)

On artificial immune systems and swarm intelligence. - Jon Timmis; Paul S. Andrews; Emma Hart (Swarm Intell., 2010)

Artificial Immune Systems. - Jon Timmis (Encyclopedia of Machine Learning, 2010)

Immune Inspired Adaptive Information Filtering: Focusing on Profile Adaptation. - Nurulhuda Firdaus Mohd Azmi; Fiona Polack; Jon Timmis (BIONETICS, 2011)

Analysing the Reliability of a Self-reconfigurable Modular Robotic System. - Lachlan Murray; Wenguo Liu 001; Alan F. T. Winfield; Jon Timmis; Andy M. Tyrrell (BIONETICS, 2011)

The Protein Processor Associative Memory on a Robotic Hand-Eye Coordination Task. - Omer Qadir; Jon Timmis; Gianluca Tempesti; Andy M. Tyrrell (BIONETICS, 2011)

Hardware architecture for a bidirectional hetero-associative Protein Processing Associative Memory. - Omer Qadir; Yang Jerry Liu; Jon Timmis; Gianluca Tempesti; Andy M. Tyrrell (IEEE Congress on Evolutionary Computation, 2011)

A flexible decentralised communication architecture on a field programmable gate array for swarm system simulations. - Antonio Gomez Zamorano; Jon Timmis; Andy M. Tyrrell (IEEE Congress on Evolutionary Computation, 2011)

A Self-scaling Instruction Generator Using Cartesian Genetic Programming. - Yang Liu 029; Gianluca Tempesti; James Alfred Walker; Jon Timmis; Andrew M. Tyrrell; Paul Bremner (EuroGP, 2011)

Towards Argument-Driven Validation of an in silico Model of Immune Tissue Organogenesis. - Kieran Alden; Paul S. Andrews; Jon Timmis; Henrique Veiga-Fernandes; Mark C. Coles (ICARIS, 2011)

Parameter Optimisation in the Receptor Density Algorithm. - James A. Hilder; Nick D. L. Owens; Peter J. Hickey; Stuart N. Cairns; David P. A. Kilgour; Jon Timmis; Andy M. Tyrrell (ICARIS, 2011)

Modelling Containment Mechanisms in the Immune System for Applications in Engineering - (Extended Abstract). - Amelia Ritahani Ismail; Jon Timmis (ICARIS, 2011)

Collective Self-detection Scheme for Adaptive Error Detection in a Foraging Swarm of Robots. - HuiKeng Lau; Jon Timmis; Iain Bate (ICARIS, 2011)

A Lymphocyte-Cytokine Network Inspired Algorithm for Data Analysis. - Yang Liu 029; Jon Timmis; Tim Clarke (ICARIS, 2011)

In Silico Investigation into CD8Treg Mediated Recovery in Murine Experimental Autoimmune Encephalomyelitis. - Richard Alun Williams; Mark Read 001; Jon Timmis; Paul S. Andrews; Vipin Kumar (ICARIS, 2011)

Bio-inspired Error Detection for Complex Systems. - Martin Drozda; Iain Bate; Jon Timmis (PRDC, 2011)

CoCoRo - The Self-Aware Underwater Swarm. - Thomas Schmickl; Ronald Thenius; Christoph Möslinger; Jon Timmis; Andy M. Tyrrell; Mark Read 001; James A. Hilder; José Halloy; Alexandre Campo; Cesare Stefanini; Luigi Manfredi; Stefano Orofino; et al. (SASO Workshops, 2011)

Process-Oriented Subsumption Architectures in Swarm Robotic Systems. - Jeremy C. Posso; Adam T. Sampson; Jonathan Simpson; Jon Timmis (CPA, 2011)

From Bidirectional Associative Memory to a noise-tolerant, robust Protein Processor Associative Memory. - Omer Qadir; Yang Jerry Liu; Gianluca Tempesti; Jon Timmis; Andy M. Tyrrell (Artif. Intell., 2011)

Collective Adaptive Systems: Challenges Beyond Evolvability - Serge Kernbach; Thomas Schmickl; Jon Timmis (CoRR, 2011)

Artificial Immune Systems (Dagstuhl Seminar 11172). - Emma Hart; Thomas Jansen 001; Jon Timmis (Dagstuhl Reports, 2011)

Advances in artificial immune systems. - Emma Hart; Chris McEwan; Jon Timmis; Andrew Hone (Evol. Intell., 2011)

Editorial for special issue on the interaction between computation and biology. - Jon Timmis; Paul S. Andrews; Susan Stepney (Nat. Comput., 2011)

Adaptive data-driven error detection in swarm robotics with statistical classifiers. - HuiKeng Lau; Iain Bate; Paul A. Cairns; Jon Timmis (Robotics Auton. Syst., 2011)

Preface. - Jon Timmis; Paul S. Andrews; Andrew Hone (Theor. Comput. Sci., 2011)

Profiling the fault tolerance for the adaptive Protein Processing Associative Memory. - Omer Qadir; Jon Timmis; Gianluca Tempesti; Andy M. Tyrrell (AHS, 2012)

Self-reconfigurable Modular e-pucks. - Lachlan Murray; Jon Timmis; Andy M. Tyrrell (ANTS, 2012)

Validation of performance data using experimental verification process in wireless sensor network. - TiongHoo Lim; Iain Bate; Jon Timmis (ETFA, 2012)

Immune-Inspired Self Healing in Wireless Sensor Networks. - TiongHoo Lim; HuiKeng Lau; Jon Timmis; Iain Bate (ICARIS, 2012)

Extending an Established Simulation: Exploration of the Possible Effects Using a Case Study in Experimental Autoimmune Encephalomyelitis. - Richard B. Greaves; Mark Read 001; Jon Timmis; Paul S. Andrews; Vipin Kumar (IPCAT, 2012)

Automatic Machine Code Generation for a Transport Triggered Architecture using Cartesian Genetic Programming. - James Alfred Walker; Yang Liu 029; Gianluca Tempesti; Jon Timmis; Andy M. Tyrrell (Int. J. Adapt. Resilient Auton. Syst., 2012)

Editorial for special issue on unconventional computation. - Jon Timmis; Kenichi Morita (Nat. Comput., 2012)

Chemical Detection Using the Receptor Density Algorithm. - James A. Hilder; Nick D. L. Owens; Mark James Neal; Peter J. Hickey; Stuart N. Cairns; David P. A. Kilgour; Jonathan Timmis; Andrew M. Tyrrell (IEEE Trans. Syst. Man Cybern. Part C, 2012)

An Introduction to Artificial Immune Systems. - Mark Read 001; Paul S. Andrews; Jon Timmis (Handbook of Natural Computing, 2012)

Scenario-based modeling to capture requirements for immune inspired profile adaptation. - Nurulhuda Firdaus Mohd Azmi; Jon Timmis; Fiona Polack (CITA, 2013)

The Triangle of Life. - Ágoston E. Eiben; Nicolas Bredèche; Mark Hoogendoorn; Jürgen Stradner; Jon Timmis; Andy M. Tyrrell; Alan F. T. Winfield (ECAL, 2013)

Immune-Inspired Error Detection for Multiple Faulty Robots in Swarm Robotics. - HuiKeng Lau; Iain Bate; Jon Timmis (ECAL, 2013)

Automated calibration of agent-based immunological simulations. - Mark Read 001; Magnus Tripp; Hannah Leonova; Louis M. Rose; Jon Timmis (ECAL, 2013)

Accelerating Immunos 99. - Paul N. Taylor; Fiona Polack; Jon Timmis (ECAL, 2013)

Towards Exogenous Fault Detection in Swarm Robotic Systems. - Alan G. Millard; Jon Timmis; Alan F. T. Winfield (TAROS, 2013)

Profiling Underwater Swarm Robotic Shoaling Performance Using Simulation. - Mark Read 001; Christoph Möslinger; Tobias Dipper; Daniela Kengyel; James A. Hilder; Ronald Thenius; Andy M. Tyrrell; Jon Timmis; Thomas Schmickl (TAROS, 2013)

In silico investigation of novel biological pathways: The role of CD200 in regulation of T cell priming in experimental autoimmune encephalomyelitis. - Richard B. Greaves; Mark Read 001; Jon Timmis; Paul S. Andrews; James A. Butler; Björn-Ole Gerckens; Vipin Kumar (Biosyst., 2013)

In silico investigation into dendritic cell regulation of CD8Treg mediated killing of Th1 cells in murine experimental autoimmune encephalomyelitis. - Richard Alun Williams; Richard B. Greaves; Mark Read 001; Jon Timmis; Paul S. Andrews; Vipin Kumar (BMC Bioinform., 2013)

A Petri Net Model of Granulomatous Inflammation: Implications for IL-10 Mediated Control of Leishmania donovani Infection. - Luca Albergante; Jon Timmis; Lynette Beattie; Paul M. Kaye (PLoS Comput. Biol., 2013)

Spartan: A Comprehensive Tool for Understanding Uncertainty in Simulations of Biological Systems. - Kieran Alden; Mark Read 001; Jonathan Timmis; Paul S. Andrews; Henrique Veiga-Fernandes; Mark C. Coles (PLoS Comput. Biol., 2013)

Modular self-assembling and self-reconfiguring e-pucks. - Lachlan Murray; Jon Timmis; Andy M. Tyrrell (Swarm Intell., 2013)

The Receptor Density Algorithm. - Nick D. L. Owens; Andrew J. Greensted; Jon Timmis; Andy M. Tyrrell (Theor. Comput. Sci., 2013)

Easing Parameter Sensitivity Analysis of Netlogo Simulations Using SPARTAN. - Kieran Alden; Jon Timmis; Mark C. Coles (ALIFE, 2014)

Novel Approaches to the Visualization and Quantification of Biological Simulations by Emulating Experimental Techniques. - James A. Butler; Kieran Alden; Henrique Veiga-Fernandes; Jon Timmis; Mark C. Coles (ALIFE, 2014)

The Relay Chain: A Scalable Dynamic Communication Link between an Exploratory Underwater Shoal and a Surface Vehicle. - Becky Naylor; Mark Read 001; Jon Timmis; Andy Tyrell (ALIFE, 2014)

Preserving Swarm Identity Over Time. - James Stovold; Simon O'Keefe; Jon Timmis (ALIFE, 2014)

Statistical hypothesis testing for chemical detection in changing environments. - Anna Ladi; Jonathan Timmis; Andy M. Tyrrell; Peter J. Hickey (CIDUE, 2014)

Multi-objective optimization applied to systematic conservation planning and spatial conservation priorities under climate change. - Shana Schlottfeldt; Jon Timmis; Maria Emília M. T. Walter; André C. P. L. F. de Carvalho; José Alexandre Felizola Diniz-Filho; Lorena M. Simon; Rafael D. Loyola; Mariana P. C. Telles (GECCO (Companion), 2014)

Run-time detection of faults in autonomous mobile robots based on the comparison of simulated and real robot behaviour. - Alan G. Millard; Jon Timmis; Alan F. T. Winfield (IROS, 2014)

The Pi Swarm: A Low-Cost Platform for Swarm Robotics Research and Education. - James A. Hilder; Rebecca Naylor; Artjoms Rizihs; Daniel Franks; Jonathan Timmis (TAROS, 2014)

Computational Models of the NF-KB Signalling Pathway. - Richard Alun Williams; Jonathan Timmis; Eva E. Qwarnstrom (Comput., 2014)

A self-adaptive fault-tolerant systems for a dependable Wireless Sensor Networks. - TiongHoo Lim; Iain Bate; Jonathan Timmis (Des. Autom. Embed. Syst., 2014)

Hardware architecture of the Protein Processing Associative Memory and the effects of dimensionality and quantisation on performance. - Omer Qadir; Alexander Lenz; Gianluca Tempesti; Jon Timmis; Tony Pipe; Andy M. Tyrrell (Genet. Program. Evolvable Mach., 2014)

Applying spartan to Understand Parameter Uncertainty in Simulations. - Kieran Alden; Mark Read 001; Paul S. Andrews; Jon Timmis; Mark C. Coles (R J., 2014)

Simulation-Based Analysis of in Situ Cellular Motility. - Mark Read 001; Jon Timmis; Tatyana Chtanova (ECAL, 2015)

Abnormality Detection in Robots Exhibiting Composite Swarm Behaviours. - Danesh Tarapore; Anders Lyhne Christensen; Jon Timmis (ECAL, 2015)

A Multi-objective Optimization Approach Associated to Climate Change Analysis to Improve Systematic Conservation Planning. - Shana Schlottfeldt; Jon Timmis; Maria Emília Telles Walter; André Carlos Ponce de Leon Ferreira de Carvalho; Lorena M. Simon; Rafael D. Loyola; José Alexandre Felizola Diniz-Filho (EMO (2), 2015)

Using Multi-Objective Artificial Immune Systems to Find Core Collections Based on Molecular Markers. - Shana Schlottfeldt; Maria Emília M. T. Walter; Jon Timmis; André C. P. L. F. de Carvalho; Mariana P. C. Telles; José Alexandre Felizola Diniz-Filho (GECCO, 2015)

An Artificial Immune System for Self-Healing in Swarm Robotic Systems. - Amelia Ritahani Ismail; Jan Dyre Bjerknes; Jon Timmis; Alan F. T. Winfield (IPCAT, 2015)

An Adaptive Classification Framework for Unsupervised Model Updating in Nonstationary Environments. - Piero Conca; Jon Timmis; Rogério de Lemos; Simon Forrest; Heather McCracken (MOD, 2015)

Utilising a simulation platform to understand the effect of domain model assumptions. - Kieran Alden; Paul S. Andrews; Henrique Veiga-Fernandes; Jon Timmis; Mark C. Coles (Nat. Comput., 2015)

Evolvable Robot Hardware. - Alan F. T. Winfield; Jon Timmis (Evolvable Hardware, 2015)

Dynamic Task Partitioning for Foraging Robot Swarms. - Edgar Buchanan; Andrew Pomfret; Jon Timmis (ANTS Conference, 2016)

From Formalised State Machines to Implementations of Robotic Controllers. - Wei Li 055; Alvaro Miyazawa; Pedro Ribeiro 002; Ana Cavalcanti 001; Jim Woodcock 001; Jon Timmis (DARS, 2016)

Competition: Multimodal Reactive-Routing Protocol to Tolerate Failure. - TiongHoo Lim; Iain Bate; Jon Timmis (EWSN, 2016)

Self-repairing mobile robotic car using astrocyte-neuron networks. - Junxiu Liu; Jim Harkin; Liam McDaid; David M. Halliday; Andy M. Tyrrell; Jon Timmis (IJCNN, 2016)

An FPGA-based hardware-efficient fault-tolerant astrocyte-neuron network. - Anju P. Johnson; David M. Halliday; Alan G. Millard; Andy M. Tyrrell; Jon Timmis; Junxiu Liu; Jim Harkin; Liam McDaid; Shvan Karim (SSCI, 2016)

The Psi Swarm: A Low-Cost Robotics Platform and Its Use in an Education Setting. - James A. Hilder; Alexander Horsfield; Alan G. Millard; Jon Timmis (TAROS, 2016)

Introducing a 3D Physics Simulation Plugin for the ARGoS Robot Simulator. - Richard Redpath; Jon Timmis; Martin A. Trefzer (TAROS, 2016)

An immune-inspired swarm aggregation algorithm for self-healing swarm robotic systems. - Jonathan Timmis; Amelia Ritahani Ismail; Jan Dyre Bjerknes; Alan F. T. Winfield (Biosyst., 2016)

Hybrid Societies: Challenges and Perspectives in the Design of Collective Behavior in Self-organizing Systems. - Heiko Hamann; Yara Khaluf; Jean Botev; Mohammad Divband Soorati; Eliseo Ferrante; Oliver Kosak; Jean-Marc Montanier; Sanaz Mostaghim; Richard Redpath; Jon Timmis; Frank Veenstra; Mostafa Wahby; et al. (Frontiers Robotics AI, 2016)

Leukocyte Motility Models Assessed through Simulation and Multi-objective Optimization-Based Model Selection. - Mark N. Read; Jacqueline Bailey; Jon Timmis; Tatyana Chtanova (PLoS Comput. Biol., 2016)

Evolving test environments to identify faults in swarm robotics algorithms. - Hao Wei; Jon Timmis; Rob Alexander (CEC, 2017)

Investigating IKK dynamics in the NF-κB signalling pathway using X-Machines. - Richard Alun Williams; Jonathan Timmis; Eva E. Qwarnstrom (CEC, 2017)

Homeostatic fault tolerance in spiking neural networks utilizing dynamic partial reconfiguration of FPGAs. - Anju P. Johnson; Junxiu Liu; Alan G. Millard; Shvan Karim; Andy M. Tyrrell; Jim Harkin; Jon Timmis; Liam McDaid; David M. Halliday (FPT, 2017)

Self-repairing Learning Rule for Spiking Astrocyte-Neuron Networks. - Junxiu Liu; Liam McDaid; Jim Harkin; John J. Wade; Shvan Karim; Anju P. Johnson; Alan G. Millard; David M. Halliday; Andy M. Tyrrell; Jon Timmis (ICONIP (6), 2017)

Modelling and Verification of Timed Robotic Controllers. - Pedro Ribeiro 002; Alvaro Miyazawa; Wei Li 055; Ana Cavalcanti 001; Jon Timmis (IFM, 2017)

Automatic property checking of robotic applications. - Alvaro Miyazawa; Pedro Ribeiro 002; Wei Li 055; Ana Cavalcanti 001; Jon Timmis (IROS, 2017)

Object recall using an experience database to accelerate robot action planning. - Richard Redpath; Jon Timmis; Martin Trefzer (IROS, 2017)

Assessing Self-Repair on FPGAs with Biologically Realistic Astrocyte-Neuron Networks. - Shvan Karim; Jim Harkin; Liam McDaid; Bryan Gardiner; Junxiu Liu; David M. Halliday; Andy M. Tyrrell; Jon Timmis; Alan G. Millard; Anju P. Johnson (ISVLSI, 2017)

Fault diagnosis in robot swarms: An adaptive online behaviour characterisation approach. - James O'Keeffe; Danesh Tarapore; Alan G. Millard; Jon Timmis (SSCI, 2017)

Towards Fault Diagnosis in Robot Swarms: An Online Behaviour Characterisation Approach. - James O'Keeffe; Danesh Tarapore; Alan G. Millard; Jon Timmis (TAROS, 2017)

ASPASIA: A toolkit for evaluating the effects of biological interventions on SBML model behaviour. - Stephanie Evans; Kieran Alden; Lourdes Cucurull-Sanchez; Christopher Larminie; Mark C. Coles; Marika C. Kullberg; Jon Timmis (PLoS Comput. Biol., 2017)

Extending and Applying Spartan to Perform Temporal Sensitivity Analyses for Predicting Changes in Influential Biological Pathways in Computational Models. - Kieran Alden; Jon Timmis; Paul S. Andrews; Henrique Veiga-Fernandes; Mark C. Coles (IEEE ACM Trans. Comput. Biol. Bioinform., 2017)

Artificial Immune Systems. - Jon Timmis (Encyclopedia of Machine Learning and Data Mining, 2017)

Modelling and Verification for Swarm Robotics. - Ana Cavalcanti 001; Alvaro Miyazawa; Augusto Sampaio 001; Wei Li 055; Pedro Ribeiro 002; Jon Timmis (IFM, 2018)

FPGA-based Fault-injection and Data Acquisition of Self-repairing Spiking Neural Network Hardware. - Shvan Karim; Jim Harkin; Liam McDaid; Bryan Gardiner; Junxiu Liu; David M. Halliday; Andy M. Tyrrell; Jon Timmis; Alan G. Millard; Anju P. Johnson (ISCAS, 2018)

Time-multiplexed System-on-Chip using Fault-tolerant Astrocyte-Neuron Networks. - Anju P. Johnson; Junxiu Liu; Alan G. Millard; Shvan Karim; Andy M. Tyrrell; Jim Harkin; Jon Timmis; Liam McDaid; David M. Halliday (SSCI, 2018)

A Hormone-Inspired Arbitration System For Self Identifying Abilities Amongst A Heterogeneous Robot Swarm. - James Wilson; Jon Timmis; Andy M. Tyrrell (SSCI, 2018)

A Hormone Arbitration System for Energy Efficient Foraging in Robot Swarms. - James Wilson; Jon Timmis; Andy M. Tyrrell (TAROS, 2018)

Fault-Tolerant Learning in Spiking Astrocyte-Neural Networks on FPGAs. - Anju P. Johnson; Junxiu Liu; Alan G. Millard; Shvan Karim; Andy M. Tyrrell; Jim Harkin; Jon Timmis; Liam McDaid; David M. Halliday (VLSID, 2018)

Cognitively-inspired homeostatic architecture can balance conflicting needs in robots. - James Stovold; Simon O'Keefe; Jon Timmis (CoRR, 2018)

The Need for Combining Implicit and Explicit Communication in Cooperative Robotic Systems. - Naomi Gildert; Alan G. Millard; Andrew Pomfret; Jon Timmis (Frontiers Robotics AI, 2018)

Adaptive Online Fault Diagnosis in Autonomous Robot Swarms. - James O'Keeffe; Danesh Tarapore; Alan G. Millard; Jon Timmis (Frontiers Robotics AI, 2018)

Homeostatic Fault Tolerance in Spiking Neural Networks: A Dynamic Hardware Perspective. - Anju P. Johnson; Junxiu Liu; Alan G. Millard; Shvan Karim; Andy M. Tyrrell; Jim Harkin; Jon Timmis; Liam McDaid; David M. Halliday (IEEE Trans. Circuits Syst. I Regul. Pap., 2018)

Comparing The Performance of Explicit and Implicit Communication in Simple Object Manipulation Tasks. - Naomi Gildert; Andrew Pomfret; Jon Timmis (CASE, 2019)

Autonomous Learning Paradigm for Spiking Neural Networks. - Junxiu Liu; Liam McDaid; Jim Harkin; Shvan Karim; Anju P. Johnson; David M. Halliday; Andy M. Tyrrell; Jon Timmis; Alan G. Millard; James A. Hilder (ICANN (1), 2019)

The ARE Robot Fabricator: How to (Re)produce Robots that Can Evolve in the Real World. - Matthew F. Hale; Edgar Buchanan; Alan F. T. Winfield; Jon Timmis; Emma Hart; Ágoston E. Eiben; Mike Angus; Frank Veenstra; Wei Li 055; Robert Woolley; Matteo De Carlo; Andy M. Tyrrell (ALIFE, 2019)

Assessing Algorithm Parameter Importance Using Global Sensitivity Analysis. - Alessio Greco; Salvatore Danilo Riccio; Jon Timmis; Giuseppe Nicosia (SEA², 2019)

Omni-Pi-tent: An Omnidirectional Modular Robot With Genderless Docking. - Robert H. Peck; Jon Timmis; Andy M. Tyrrell (TAROS (2), 2019)

Erratum to: NACO special issue editorial. - Simon J. Hickinbotham; Susan Stepney; Jon Timmis (Nat. Comput., 2019)

Verified simulation for robotics. - Ana Cavalcanti 001; Augusto Sampaio 001; Alvaro Miyazawa; Pedro Ribeiro 002; Madiel Conserva Filho; André Didier; Wei Li 055; Jon Timmis (Sci. Comput. Program., 2019)

RoboChart: modelling and verification of the functional behaviour of robotic applications. - Alvaro Miyazawa; Pedro Ribeiro 002; Wei Li 055; Ana Cavalcanti 001; Jon Timmis; Jim Woodcock 001 (Softw. Syst. Model., 2019)

Exploring Self-Repair in a Coupled Spiking Astrocyte Neural Network. - Junxiu Liu; Liam McDaid; Jim Harkin; Shvan Karim; Anju P. Johnson; Alan G. Millard; James A. Hilder; David M. Halliday; Andy M. Tyrrell; Jon Timmis (IEEE Trans. Neural Networks Learn. Syst., 2019)

Fault Detection in a Swarm of Physical Robots Based on Behavioral Outlier Detection. - Danesh Tarapore; Jon Timmis; Anders Lyhne Christensen (IEEE Trans. Robotics, 2019)

Sample and time efficient policy learning with CMA-ES and Bayesian Optimisation. - Léni K. Le Goff; Edgar Buchanan; Emma Hart; Ágoston E. Eiben; Wei Li 055; Matteo De Carlo; Matthew F. Hale; Mike Angus; Robert Woolley; Jon Timmis; Alan F. T. Winfield; Andrew M. Tyrrell (ALIFE, 2020)

Evolution of Diverse, Manufacturable Robot Body Plans. - Edgar Buchanan; Léni K. Le Goff; Emma Hart; Ágoston E. Eiben; Matteo De Carlo; Wei Li 055; Matthew F. Hale; Mike Angus; Robert Woolley; Alan F. T. Winfield; Jon Timmis; Andy M. Tyrrell (SSCI, 2020)

Hardware Design for Autonomous Robot Evolution. - Matthew F. Hale; Mike Angus; Edgar Buchanan; Wei Li 055; Robert Woolley; Léni K. Le Goff; Matteo De Carlo; Jon Timmis; Alan F. T. Winfield; Emma Hart; Ágoston E. Eiben; Andy M. Tyrrell (SSCI, 2020)

Strategies for calibrating models of biology. - Mark N. Read; Kieran Alden; Jon Timmis; Paul S. Andrews (Briefings Bioinform., 2020)

Bootstrapping Artificial Evolution to Design Robots for Autonomous Fabrication. - Edgar Buchanan; Léni K. Le Goff; Wei Li 055; Emma Hart; Ágoston E. Eiben; Matteo De Carlo; Alan F. T. Winfield; Matthew F. Hale; Robert Woolley; Mike Angus; Jon Timmis; Andy M. Tyrrell (Robotics, 2020)

Using Emulation to Engineer and Understand Simulations of Biological Systems. - Kieran Alden; Jason Cosgrove; Mark C. Coles; Jon Timmis (IEEE ACM Trans. Comput. Biol. Bioinform., 2020)

Cylindabot: Transformable Wheg Robot Traversing Stepped and Sloped Environments. - Robert Woolley; Jon Timmis; Andy M. Tyrrell (Robotics, 2021)

A study of error diversity in robotic swarms for task partitioning in foraging tasks. - Edgar Buchanan; Kieran Alden; Andrew Pomfret; Jon Timmis; Andy M. Tyrrell (Frontiers Robotics AI, 2022)

Assessing ranking and effectiveness of evolutionary algorithm hyperparameters using global sensitivity analysis methodologies. - Varun Ojha 001; Jon Timmis; Giuseppe Nicosia (Swarm Evol. Comput., 2022)

Bringing RoboStar and RT-Tester Together. - Ana Cavalcanti 001; Alvaro Miyazawa; Uwe Schulze; Jon Timmis (Applicable Formal Methods for Safe Industrial Products, 2023)

Morpho Evolution With Learning Using a Controller Archive as an Inheritance Mechanism. - Léni K. Le Goff; Edgar Buchanan; Emma Hart; Ágoston E. Eiben; Wei Li 055; Matteo De Carlo; Alan F. T. Winfield; Matthew F. Hale; Robert Woolley; Mike Angus; Jon Timmis; Andy M. Tyrrell (IEEE Trans. Cogn. Dev. Syst., 2023)

Practical hardware for evolvable robots. - Mike Angus; Edgar Buchanan; Léni K. Le Goff; Emma Hart; Ágoston E. Eiben; Matteo De Carlo; Alan F. T. Winfield; Matthew F. Hale; Robert Woolley; Jon Timmis; Andy M. Tyrrell (Frontiers Robotics AI, 2023)

Editorial: Autonomous (re)production, learning and bio-inspired robotics workshop. - Andy M. Tyrrell; Emma Hart; Alan F. T. Winfield; A. E. Eiben; Jon Timmis (Frontiers Robotics AI, 2024)

Software engineering for robotics. - Ana Cavalcanti 001; Alvaro Miyazawa; Jon Timmis (Robotics Auton. Syst., 2024)

Towards a Unified Framework for Software-Hardware Integration in Evolutionary Robotics. - Edgar Buchanan; Leni K. Le Goff; Matthew F. Hale; Emma Hart; Ágoston E. Eiben; Matteo De Carlo; Mike Angus; Robert Woolley; Jon Timmis; Alan F. T. Winfield; Andrew M. Tyrrell (Robotics, 2024)

Formal design, verification and implementation of robotic controller software via RoboChart and RoboTool. - Wei Li 055; Pedro Ribeiro 002; Alvaro Miyazawa; Richard Redpath; Ana Cavalcanti 001; Kieran Alden; Jim Woodcock 001; Jon Timmis (Auton. Robots, 2024)

Evaluation of Frameworks That Combine Evolution and Learning to Design Robots in Complex Morphological Spaces. - Wei Li 055; Edgar Buchanan; Léni K. Le Goff; Emma Hart; Matthew F. Hale; Bingsheng Wei; Matteo De Carlo; Mike Angus; Robert Woolley; Zhongxue Gan; Alan F. T. Winfield; Jon Timmis; et al. (IEEE Trans. Evol. Comput., 2024)